RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 LACTB2Q53H82 288 aaPredicted RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 C1orf220Q5T0J3 134 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 FOXR1Q6PIV2 292 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 RELL1Q8IUW5 271 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CERS5Q8N5B7 392 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CCDC148Q8NFR7 591 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 WDR66Q8TBY9 1149 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 SCFD1Q8WVM8 642 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CNOT6LQ96LI5 555 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 POLRMTO00411 1230 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 SLC16A3O15427 465 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 DDX3YO15523 660 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 USP17L8P0C7I0 530 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CSB-PGBD3P0DP91 1061 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 FCER1AP12319 257 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ALADP13716 330 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 POLD1P28340 1107 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 DRG2P55039 364 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CLDN10P78369 228 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ZNF543Q08ER8 600 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 MYBPC2Q14324 1141 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ASPRV1Q53RT3 343 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 NCAPH2Q6IBW4 605 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 EHBP1Q8NDI1 1231 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 GLIS3Q8NEA6 775 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 SPATA4Q8NEY3 305 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 C7orf43Q8WVR3 580 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CENPTQ96BT3 561 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 OSBPL9Q96SU4 736 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 SELENOOQ9BVL4 669 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 TSPYL1Q9H0U9 437 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 JMJD4Q9H9V9 463 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 PDE11AQ9HCR9 933 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ARGLU1Q9NWB6 273 aaPredicted RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ZNF652Q9Y2D9 606 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 BICDL2A1A5D9 508 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 KCNQ2O43526 872 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 PPFIA4O75335 1185 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 GCFC2P16383 781 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 KIF5BP33176 963 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CDK8P49336 464 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 LMNB2Q03252 620 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 TRIM29Q14134 588 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 PLCB4Q15147 1175 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 ALS2CLQ60I27 953 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 PIK3AP1Q6ZUJ8 805 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 TMC4Q7Z404 712 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 IQCA1Q86XH1 822 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 TRIM58Q8NG06 486 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 HDAC7Q8WUI4 952 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 KAT2BQ92831 832 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CRNKL1Q9BZJ0 848 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 LRRC4BQ9NT99 713 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 HDAC6Q9UBN7 1215 aa4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 DMGDHQ9UI17 866 aaKnown RBP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 NIP7Q9Y221 180 aaKnown RBP eCLIP4.97□□□□□ -1.61
GPCPD1-202ENST00000418646 CCDC66A2RUB6 948 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 EIF3HO15372 352 aaKnown RBP eCLIP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 RASSF9O75901 435 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 NUDT17P0C025 328 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 HIBADHP31937 336 aaKnown RBP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 KRT9P35527 623 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 USP11P51784 963 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 SAFBQ15424 915 aaKnown RBP eCLIP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 ZNF174Q15697 407 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 SLC18A3Q16572 532 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 DNTTIP2Q5QJE6 756 aaKnown RBP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 C10orf76Q5T2E6 689 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 ZNF772Q68DY9 489 aaPredicted RBP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 LMOD2Q6P5Q4 547 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 GBP6Q6ZN66 633 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 NEK8Q86SG6 692 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 GMCL1Q96IK5 515 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 EFCC1Q9HA90 598 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 DDX4Q9NQI0 724 aaKnown RBP4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 SAR1BQ9Y6B6 198 aa4.96□□□□□ -1.61
GPCPD1-202ENST00000418646 A0A0U1RQG5 324 aaPredicted RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 XBP1P17861 261 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 CYP11B2P19099 503 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 SREBF1P36956 1147 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 ATP6V1AP38606 617 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 HDLBPQ00341 1268 aaKnown RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 RHBDF2Q6PJF5 856 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 HHIPL2Q6UWX4 724 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 SH3BP5LQ7L8J4 393 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 CCDC12Q8WUD4 166 aaPredicted RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 MAF1Q9H063 256 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 NUCKS1Q9H1E3 243 aaKnown RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 BLZF1Q9H2G9 400 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 NDST4Q9H3R1 872 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 PCDHA13Q9Y5I0 950 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 PTPRDP23468 1912 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 MYO1CO00159 1063 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 EIF3DO15371 548 aaKnown RBP eCLIP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 KIF5CO60282 957 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 PPFIA2O75334 1257 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 URI1O94763 535 aaPredicted RBP4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 MCM3P25205 808 aa4.96□□□□□ -1.62
GPCPD1-202ENST00000418646 RXRBP28702 533 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms