RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 EXOC7Q9UPT5 735 aa9.34□□□□□ -0.91
USP54-203ENST00000418501 ZNF500O60304 480 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 RPA1P27694 616 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 DSG3P32926 999 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 EPHX2P34913 555 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 E2F4Q16254 413 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 EAPPQ56P03 285 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 SPECC1LQ69YQ0 1117 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 KCNV1Q6PIU1 500 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 CCDC84Q86UT8 332 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 MBOAT7Q96N66 472 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 PLIN2Q99541 437 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 SLC38A10Q9HBR0 1119 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 MYH8P13535 1937 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 STAT3P40763 770 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 CETN1Q12798 172 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 HERC4Q5GLZ8 1057 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 GUF1Q8N442 669 aaKnown RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 RETREG2Q8NC44 543 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 SPATA20Q8TB22 786 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 XPO4Q9C0E2 1151 aaKnown RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 RAVER2Q9HCJ3 691 aaKnown RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 FANCLQ9NW38 375 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 A0A1W2PRG0 241 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 CETN3O15182 167 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 HOXA13P31271 388 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 FKBP1BP68106 108 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 SNRNP48Q6IEG0 339 aaKnown RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 GPRASP2Q96D09 838 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 SLC10A4Q96EP9 437 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 ZSWIM4Q9H7M6 989 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 EYA4O95677 639 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 MYCLP12524 364 aaPredicted RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 DNM2P50570 870 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 SMTNP53814 917 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 HMGCS2P54868 508 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 CUL4BQ13620 913 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 HYIQ5T013 277 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 PCNX4Q63HM2 1172 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 ANKRD35Q8N283 1001 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 NUCKS1Q9H1E3 243 aaKnown RBP9.33□□□□□ -0.92
USP54-203ENST00000418501 KCNMB3Q9NPA1 279 aa9.33□□□□□ -0.92
USP54-203ENST00000418501 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP54-203ENST00000418501 FOCADQ5VW36 1801 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 KIF13BQ9NQT8 1826 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 MEIS2O14770 477 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 SKILP12757 684 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 RMDN3Q96TC7 470 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 METTL14Q9HCE5 456 aaKnown RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 KCNJ18B7U540 433 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 AKR1B15C9JRZ8 316 aaPredicted RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 PRR29P0C7W0 189 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 INPP5BP32019 993 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 GRIN1Q05586 938 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 KCNJ12Q14500 433 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 TMEM119Q4V9L6 283 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 SIAH1Q8IUQ4 282 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 C2orf69Q8N8R5 385 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 HOMER2Q9NSB8 354 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 LARSQ9P2J5 1176 aaKnown RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 TCHHQ07283 1943 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 PHF20L1A8MW92 1017 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 STX17P56962 302 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 SNAPC2Q13487 334 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 MTMR1Q13613 665 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 MCM6Q14566 821 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 NAALADL2Q58DX5 795 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 ERCC4Q92889 916 aaPredicted RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 TEPSINQ96N21 525 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 NAP1L5Q96NT1 182 aaPredicted RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 CGNQ9P2M7 1197 aaKnown RBP9.32□□□□□ -0.92
USP54-203ENST00000418501 UBE4BO95155 1302 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 PHLPP2Q6ZVD8 1323 aa9.32□□□□□ -0.92
USP54-203ENST00000418501 WDR64B1ANS9 1081 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 HSD17B4P51659 736 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 KCTD2Q14681 263 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 SLC35G1Q2M3R5 365 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 TPH2Q8IWU9 490 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 FAM184BQ9ULE4 1060 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 LOC102724159A0A0B4J2E5 919 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 IPO5O00410 1097 aaKnown RBP9.31□□□□□ -0.92
USP54-203ENST00000418501 VWA5AO00534 786 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 SLC37A4O43826 429 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 DDNO94850 711 aaPredicted RBP9.31□□□□□ -0.92
USP54-203ENST00000418501 PSAPP07602 524 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 PTGS1P23219 599 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 SNAP25P60880 206 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 PPIL2Q13356 520 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 PWP2Q15269 919 aaKnown RBP9.31□□□□□ -0.92
USP54-203ENST00000418501 STXBP2Q15833 593 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 SH3D19Q5HYK7 790 aa9.31□□□□□ -0.92
USP54-203ENST00000418501 MIS18BP1Q6P0N0 1132 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms