RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
RFC1-203ENST00000418436 PSTPIP2Q9H939 334 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
RFC1-203ENST00000418436 SYNRGQ9UMZ2 1314 aa12.1□□□□□ -0.47
RFC1-203ENST00000418436 GRXCR2A6NFK2 248 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 STXBP3O00186 592 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 CTAGE5O15320 804 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
RFC1-203ENST00000418436 PGK1P00558 417 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 SCG2P13521 617 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 SMPD1P17405 629 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
RFC1-203ENST00000418436 GJA9P57773 515 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 SCRN1Q12765 414 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 PGM5Q15124 567 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 STXBP2Q15833 593 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 TMEM63BQ5T3F8 832 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 GJC2Q5T442 439 aaPredicted RBP12.09□□□□□ -0.47
RFC1-203ENST00000418436 CCSAPQ6IQ19 270 aaPredicted RBP12.09□□□□□ -0.47
RFC1-203ENST00000418436 FCHSD1Q86WN1 690 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 CUL5Q93034 780 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 PHKBQ93100 1093 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 C11orf49Q9H6J7 331 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 RIC8AQ9NPQ8 531 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 Q9Y3F1 56 aa12.09□□□□□ -0.47
RFC1-203ENST00000418436 CST5P28325 142 aaPredicted RBP12.08□□□□□ -0.48
RFC1-203ENST00000418436 NAPAP54920 295 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 STK3Q13188 491 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 ME3Q16798 604 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
RFC1-203ENST00000418436 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 RNF180Q86T96 592 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 SCFD2Q8WU76 684 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 SLC26A6Q9BXS9 759 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 SLKQ9H2G2 1235 aaPredicted RBP12.08□□□□□ -0.48
RFC1-203ENST00000418436 PHF24Q9UPV7 400 aa12.08□□□□□ -0.48
RFC1-203ENST00000418436 ESYT2A0FGR8 921 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 MYADML2A6NDP7 307 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 SMCO2A6NFE2 343 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 KBTBD13C9JR72 458 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 CPLX1O14810 134 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 RGS20O76081 388 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 AKAP17AQ02040 695 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 CPLX2Q6PUV4 134 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 TSEN34Q9BSV6 310 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 HTATIP2Q9BUP3 242 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 BACH2Q9BYV9 841 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 ZMYND12Q9H0C1 365 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 GLT8D2Q9H1C3 349 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
RFC1-203ENST00000418436 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
RFC1-203ENST00000418436 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
RFC1-203ENST00000418436 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 STAM2O75886 525 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 ARIH2O95376 493 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 DEXIO95424 95 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 LARGE1O95461 756 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 C6orf222P0C671 652 aaPredicted RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 MYCLP12524 364 aaPredicted RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 PTGS1P23219 599 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 CCND2P30279 289 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 ADCY7P51828 1080 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 MRPS9P82933 396 aaKnown RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 UBE2SQ16763 222 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 PCNX4Q63HM2 1172 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 XRRA1Q6P2D8 792 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 SEPT14Q6ZU15 432 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 TLK2Q86UE8 772 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 TRIM22Q8IYM9 498 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 GTF3C6Q969F1 213 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 TBC1D32Q96NH3 1257 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 SENP6Q9GZR1 1112 aaPredicted RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
RFC1-203ENST00000418436 PCDHA6Q9UN73 950 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 PCDHA8Q9Y5H6 950 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 STK36Q9NRP7 1315 aa12.06□□□□□ -0.48
RFC1-203ENST00000418436 MOXD2PA6NHM9 499 aa12.05□□□□□ -0.48
RFC1-203ENST00000418436 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
RFC1-203ENST00000418436 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
RFC1-203ENST00000418436 CDKL5O76039 1030 aa12.05□□□□□ -0.48
RFC1-203ENST00000418436 FOSP01100 380 aaPredicted RBP12.05□□□□□ -0.48
RFC1-203ENST00000418436 TXNP10599 105 aaKnown RBP12.05□□□□□ -0.48
RFC1-203ENST00000418436 ACLYP53396 1101 aa12.05□□□□□ -0.48
RFC1-203ENST00000418436 RABEP1Q15276 862 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms