RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 CUEDC2Q9H467 287 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 PANK4Q9NVE7 773 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 RRP15Q9Y3B9 282 aaKnown RBP13.17□□□□□ -0.3
LIMK1-202ENST00000418310 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 PCDHAC2Q9Y5I4 1007 aa13.17□□□□□ -0.3
LIMK1-202ENST00000418310 IRS2Q9Y4H2 1338 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 GOLGA6BA6NDN3 693 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 MYL1P05976 194 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 TRIM58Q8NG06 486 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 TSG101Q99816 390 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 PACSIN1Q9BY11 444 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 DNAJC5Q9H3Z4 198 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 TMEM51Q9NW97 253 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 MTMR4Q9NYA4 1195 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 ACTN1P12814 892 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 GUCY2FP51841 1108 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 USH1GQ495M9 461 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 FAM26FQ5R3K3 315 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 CCNI2Q6ZMN8 369 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-202ENST00000418310 MYOCDQ8IZQ8 938 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 TBC1D5Q92609 795 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 JMJD4Q9H9V9 463 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 RBM12Q9NTZ6 932 aaKnown RBP13.16□□□□□ -0.3
LIMK1-202ENST00000418310 ADAMTS1Q9UHI8 967 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
LIMK1-202ENST00000418310 PCDHA12Q9UN75 941 aa13.16□□□□□ -0.3
LIMK1-202ENST00000418310 CYP4A11Q02928 519 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 ZSCAN29Q8IWY8 852 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-202ENST00000418310 RETREG2Q8NC44 543 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 RAB34Q9BZG1 259 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 KIAA1551Q9HCM1 1747 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 POTEFA5A3E0 1075 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 G3V3G9 751 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 POTEEQ6S8J3 1075 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 JRKLQ9Y4A0 524 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 RBM5P52756 815 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIMK1-202ENST00000418310 EHHADHQ08426 723 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
LIMK1-202ENST00000418310 LRRC55Q6ZSA7 311 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 SH2D3CQ8N5H7 860 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 CENPHQ9H3R5 247 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
LIMK1-202ENST00000418310 GOLGA6CA6NDK9 693 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 SERPINB2P05120 415 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 GOLGA6DP0CG33 693 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 PAFAH1B1P43034 410 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 NFIAQ12857 509 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 C8orf74Q6P047 294 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 KLHL7Q8IXQ5 586 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 IKZF4Q9H2S9 585 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 GOLGA6AQ9NYA3 693 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 PALMO75781 387 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■■■□ 21.9
LIMK1-202ENST00000418310 TRADDQ15628 312 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 TRMT1LQ7Z2T5 733 aaKnown RBP13.14□□□□□ -0.31
LIMK1-202ENST00000418310 ZFPM1Q8IX07 1006 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 TSEN2Q8NCE0 465 aaKnown RBP13.14□□□□□ -0.31
LIMK1-202ENST00000418310 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 HAS1Q92839 578 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 RUFY1Q96T51 708 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 MAGEF1Q9HAY2 307 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.14□□□□□ -0.31
LIMK1-202ENST00000418310 AGPSO00116 658 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 FAM83BQ5T0W9 1011 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 PDXDC1Q6P996 788 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 GUF1Q8N442 669 aaKnown RBP13.14□□□□□ -0.31
LIMK1-202ENST00000418310 BAP1Q92560 729 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 MED4Q9NPJ6 270 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 HYOU1Q9Y4L1 999 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 COL4A3BPQ9Y5P4 624 aa13.14□□□□□ -0.31
LIMK1-202ENST00000418310 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 KLRC1P26715 233 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 NOP2P46087 812 aaKnown RBP13.13□□□□□ -0.31
LIMK1-202ENST00000418310 PDE4CQ08493 712 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 SRLQ86TD4 932 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 RIOX1Q9H6W3 641 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-202ENST00000418310 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 TLR2O60603 784 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 CASP5P51878 434 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms