RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 MBTPS1Q14703 1052 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TRIM71Q2Q1W2 868 aaKnown RBP9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TIGD5Q53EQ6 642 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TRAF7Q6Q0C0 670 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 IQCA1Q86XH1 822 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 FBXO11Q86XK2 927 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ADGRF4Q8IZF3 695 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MYOCDQ8IZQ8 938 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 BANK1Q8NDB2 785 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DBF4BQ8NFT6 615 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NEK9Q8TD19 979 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 FAM227BQ96M60 508 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KCNH6Q9H252 994 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CPVLQ9H3G5 476 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 COL20A1Q9P218 1284 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PCDHB15Q9Y5E8 787 aa9.18□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MYO7AQ13402 2215 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 A0A0D9SFI3 127 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 POTEB3A0JP26 581 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 H3BNC9 293 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 H3BQ06 376 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DCXO43602 365 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DHX16O60231 1041 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CFBP00751 764 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TGFB3P10600 412 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HOXD8P13378 290 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GPM6BQ13491 265 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 QRICH1Q2TAL8 776 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ASPRV1Q53RT3 343 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PLEKHG4Q58EX7 1191 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ANKRD45Q5TZF3 282 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MYSM1Q5VVJ2 828 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 POTEBQ6S5H4 581 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 EP400NLQ6ZTU2 488 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SERINC5Q86VE9 423 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PNMA1Q8ND90 353 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SEPT8Q92599 483 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 WNT8BQ93098 351 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PABPC5Q96DU9 382 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SPATA33Q96N06 139 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 YME1L1Q96TA2 773 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZKSCAN3Q9BRR0 538 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 UPF3BQ9BZI7 483 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KAT14Q9H8E8 782 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 VAT1LQ9HCJ6 419 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PXMP2Q9NR77 195 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MAP3K20Q9NYL2 800 aaKnown RBP9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SALL3Q9BXA9 1300 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 C17orf102A2RUQ5 167 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZNF213O14771 459 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NCK2O43639 380 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PARP1P09874 1014 aaKnown RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MYCLP12524 364 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MRE11P49959 708 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PDE1AP54750 535 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MKRN4PQ13434 485 aaPredicted RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CELF3Q5SZQ8 465 aaKnown RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TMEM192Q8IY95 271 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 SAMD3Q8N6K7 520 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ANKS1AQ92625 1134 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ATP6V0A1Q93050 837 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TOP1MTQ969P6 601 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 AMNQ9BXJ7 453 aa9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NSUN3Q9H649 340 aaKnown RBP9.16□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CCDC171Q6TFL3 1326 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 H3BRB1 525 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 CAND2O75155 1236 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 KDM4AO75164 1064 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 UPP2O95045 317 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GGPS1O95749 300 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 GNAT1P11488 350 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HSD17B4P51659 736 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HIC1Q14526 733 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 HSDL1Q3SXM5 330 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TCEAL5Q5H9L2 206 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 STOX1Q6ZVD7 989 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZNF589Q86UQ0 364 aaPredicted RBP9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 VSIG10LQ86VR7 867 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TBC1D10CQ8IV04 446 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ADHFE1Q8IWW8 467 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 ZSCAN10Q96SZ4 725 aaPredicted RBP9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 PDCD2LQ9BRP1 358 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 C16orf70Q9BSU1 422 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 IFIH1Q9BYX4 1025 aaKnown RBP9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 TUT1Q9H6E5 874 aaKnown RBP9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 JMJD4Q9H9V9 463 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 MLXIPQ9HAP2 919 aa9.15□□□□□ -0.94
HLA-DPA1-241ENST00000417724 NEDD4P46934 1319 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 C19orf67A6NJJ6 358 aa9.14□□□□□ -0.95
HLA-DPA1-241ENST00000417724 TRIM6-TRIM34B2RNG4 842 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms