RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 GGPS1O95749 300 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 CD4P01730 458 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 CPA1P15085 419 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 ADD1P35611 737 aaKnown RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 IRX5P78411 483 aaPredicted RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 FAM47CQ5HY64 1035 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 CELF3Q5SZQ8 465 aaKnown RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 WWC2Q6AWC2 1192 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 MFSD5Q6N075 450 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 GPR153Q6NV75 609 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 COPS5Q92905 334 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 GPKOWQ92917 476 aaPredicted RBP eCLIP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 BADQ92934 168 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 TRIM43Q96BQ3 446 aaPredicted RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 TBX21Q9UL17 535 aa12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 RANBP2P49792 3224 aaKnown RBP12.55□□□□□ -0.4
SNRNP25-204ENST00000417493 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 IFNAR1P17181 557 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 PDIA3P30101 505 aaKnown RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 CDC27P30260 824 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 FXR1P51114 621 aaKnown RBP eCLIP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 FUT2Q10981 343 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 METTL7BQ6UX53 244 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 RPUSD2Q8IZ73 545 aaKnown RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 TNPO1Q92973 898 aaKnown RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 HIPK3Q9H422 1215 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 ZNF215Q9UL58 517 aaPredicted RBP12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 DOCK5Q9H7D0 1870 aa12.54□□□□□ -0.4
SNRNP25-204ENST00000417493 SPATA31C2B4DYI2 1134 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 STXBP3O00186 592 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 RGS20O76081 388 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 XBP1P17861 261 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 UBA1P22314 1058 aaKnown RBP12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 ZNF76P36508 570 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 PSMC6P62333 389 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 BFSP2Q13515 415 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 MTMR1Q13613 665 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 TMEM63BQ5T3F8 832 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 SH3RF1Q7Z6J0 888 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 IL31RAQ8NI17 732 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 C22orf23Q9BZE7 217 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 FAM217BQ9NTX9 383 aaPredicted RBP12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 TCEAL9Q9UHQ7 104 aa12.53□□□□□ -0.4
SNRNP25-204ENST00000417493 B4GALT4O60513 344 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 DEXIO95424 95 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 SLC34A2O95436 690 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 PARNO95453 639 aaKnown RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 F2P00734 622 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 PFKMP08237 780 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 GNAT1P11488 350 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 HOXD8P13378 290 aaPredicted RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 RFC2P35250 354 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 PSEN2P49810 448 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 CHMP4BP1P59074 171 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 UBE2SQ16763 222 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 REXO1Q8N1G1 1221 aaKnown RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 CAGE1Q8TC20 777 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 SLC26A6Q9BXS9 759 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 UPF3BQ9BZI7 483 aaKnown RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 ZMYND12Q9H0C1 365 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 SLKQ9H2G2 1235 aaPredicted RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 MYH9P35579 1960 aaKnown RBP12.52□□□□□ -0.41
SNRNP25-204ENST00000417493 PITPNM1O00562 1244 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 TOB2Q14106 344 aaPredicted RBP12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 MFSD10Q14728 455 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 PTGISQ16647 500 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 WASF1Q92558 559 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 PPP1R12CQ9BZL4 782 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 TRPV6Q9H1D0 765 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 JADE2Q9NQC1 790 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 GRIN2DO15399 1336 aa12.51□□□□□ -0.41
SNRNP25-204ENST00000417493 H3BRB1 525 aa12.5□□□□□ -0.41
SNRNP25-204ENST00000417493 ACTN1P12814 892 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms