RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 TGFB3P10600 412 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 RAG1P15918 1043 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 PURAQ00577 322 aaKnown RBP12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 SCRN1Q12765 414 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 NEDD9Q14511 834 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 SNX17Q15036 470 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 PKN1Q16512 942 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 DGKDQ16760 1214 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 ANO3Q9BYT9 981 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 ALDH8A1Q9H2A2 487 aaPredicted RBP12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 NOD1Q9Y239 953 aa12.64□□□□□ -0.39
TM9SF4-203ENST00000417389 FRMPD4Q14CM0 1322 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 PFKFB2O60825 505 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 DTNBO60941 627 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 XBP1P17861 261 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 MAGEA10P43363 369 aaPredicted RBP12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 NKX3-2P78367 333 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 MTMR1Q13613 665 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 CELF3Q5SZQ8 465 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 C1orf53Q5VUE5 145 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 CYFIP1Q7L576 1253 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 PPP1R13LQ8WUF5 828 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 CDHR1Q96JP9 859 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 INPP4AQ96PE3 977 aaPredicted RBP12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 UBE2OQ9C0C9 1292 aaKnown RBP12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 PDLIM7Q9NR12 457 aa12.63□□□□□ -0.39
TM9SF4-203ENST00000417389 ALPK3Q96L96 1907 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 SPATA31C2B4DYI2 1134 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ZNF286BP0CG31 522 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 SP2Q02086 613 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ME3Q16798 604 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 NBPF20Q3BBV1 942 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 MCTP2Q6DN12 878 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ANKRD33Q7Z3H0 272 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 TEX2Q8IWB9 1127 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 GIMAP8Q8ND71 665 aaPredicted RBP12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 PPTC7Q8NI37 304 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 RASGRP4Q8TDF6 673 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 WASF1Q92558 559 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 GPRASP2Q96D09 838 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ZMYND12Q9H0C1 365 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 SH3GLB2Q9NR46 395 aa12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ORC3Q9UBD5 711 aaPredicted RBP12.62□□□□□ -0.39
TM9SF4-203ENST00000417389 ICAM3P32942 547 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 FOSBP53539 338 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 ARHGAP4P98171 946 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 FAAP100Q0VG06 881 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 UTP14CQ5TAP6 766 aaKnown RBP12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 METTL7BQ6UX53 244 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 C7orf31Q8N865 590 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 BADQ92934 168 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 TOX2Q96NM4 488 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 AIFM3Q96NN9 605 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 SDF4Q9BRK5 362 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 SEZ6LQ9BYH1 1024 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 PPP1R12CQ9BZL4 782 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 TRPV6Q9H1D0 765 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
TM9SF4-203ENST00000417389 TRIM43BA6NCK2 446 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 ST18O60284 1047 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 PPFIA4O75335 1185 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 LARGE1O95461 756 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 SUPT20HL2P0C7V6 817 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 ITGB5P18084 799 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 SREBF1P36956 1147 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 CDK7P50613 346 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 TRIM29Q14134 588 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 HSDL1Q3SXM5 330 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 CEP55Q53EZ4 464 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 TRIM43Q96BQ3 446 aaPredicted RBP12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 MXRA8Q9BRK3 442 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 JADE2Q9NQC1 790 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 TRMT13Q9NUP7 481 aaKnown RBP12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 TCEAL9Q9UHQ7 104 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 PCDHA4Q9UN74 947 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 UBIAD1Q9Y5Z9 338 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
TM9SF4-203ENST00000417389 DDX39AO00148 427 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 B4GALT4O60513 344 aa12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 CLK2P49760 499 aaKnown RBP12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 PSEN2P49810 448 aa12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 SEMA3FQ13275 785 aa12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 MFSD10Q14728 455 aa12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 RABEP1Q15276 862 aa12.59□□□□□ -0.39
TM9SF4-203ENST00000417389 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms