RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CCSAPQ6IQ19 270 aaPredicted RBP26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 RASGRP4Q8TDF6 673 aa26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 COPS5Q92905 334 aa26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 JADE2Q9NQC1 790 aa26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 KIF3AQ9Y496 699 aa26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 LRRC37A2A6NM11 1700 aa26.34■■□□□ 1.81
SMARCB1-205ENST00000417137 MYADML2A6NDP7 307 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 CTAGE5O15320 804 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 CYP3A4P08684 503 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 ACLYP53396 1101 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 BEX3Q00994 111 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 NEDD9Q14511 834 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 GIMAP8Q8ND71 665 aaPredicted RBP26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 MXRA8Q9BRK3 442 aa26.33■■□□□ 1.81
SMARCB1-205ENST00000417137 ADAMTS3O15072 1205 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 KPNA6O60684 536 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 CABYRO75952 493 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 ASGR1P07306 291 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 ITGB5P18084 799 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 MTMR1Q13613 665 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 CEP55Q53EZ4 464 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 KRT25Q7Z3Z0 450 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 EMID1Q96A84 441 aaPredicted RBP26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 GLT1D1Q96MS3 346 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 SENP7Q9BQF6 1050 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 MLXIPQ9HAP2 919 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 POLR3EQ9NVU0 708 aa26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.32■■□□□ 1.8
SMARCB1-205ENST00000417137 A6NJR5 290 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 PTGS1P23219 599 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 USP11P51784 963 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 ARHGAP1Q07960 439 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 NPY5RQ15761 445 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 CELF3Q5SZQ8 465 aaKnown RBP26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 NIPA1Q7RTP0 329 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 FERMT2Q96AC1 680 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 VTI1AQ96AJ9 217 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 C8orf76Q96K31 380 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 GJB4Q9NTQ9 266 aa26.31■■□□□ 1.8
SMARCB1-205ENST00000417137 CCDC194A0A1B0GVG4 234 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 M0R2N6 131 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 GGPS1O95749 300 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 UBA1P22314 1058 aaKnown RBP26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 KRT2P35908 639 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 IRX5P78411 483 aaPredicted RBP26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 NONOQ15233 471 aaKnown RBP eCLIP26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 SAFBQ15424 915 aaKnown RBP eCLIP26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 MYSM1Q5VVJ2 828 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 CRYGNQ8WXF5 182 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 DPF3Q92784 378 aa26.3■■□□□ 1.8
SMARCB1-205ENST00000417137 A0A1W2PQ45 241 aaPredicted RBP26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 A0A1W2PQY0 241 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 MEIS1O00470 390 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 MMP1P03956 469 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 SP2Q02086 613 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 SEMA3FQ13275 785 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 KRT40Q6A162 431 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 AFG1LQ8WV93 481 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 STARD7Q9NQZ5 370 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 FRMPD3Q5JV73 1810 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 ELP1O95163 1332 aa26.29■■□□□ 1.8
SMARCB1-205ENST00000417137 SLC39A5Q6ZMH5 540 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 PPTC7Q8NI37 304 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 TBCKQ8TEA7 893 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 SPATA33Q96N06 139 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 KCNH7Q9NS40 1196 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 BRCA2P51587 3418 aa26.28■■□□□ 1.8
SMARCB1-205ENST00000417137 MYL3P08590 195 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 CIITAP33076 1130 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 FOSBP53539 338 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 ATN1P54259 1190 aaPredicted RBP26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 DGKDQ16760 1214 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 METTL7BQ6UX53 244 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 CXCL17Q6UXB2 119 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 PLA2G4DQ86XP0 818 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 CYP2W1Q8TAV3 490 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 SMC3Q9UQE7 1217 aa26.27■■□□□ 1.8
SMARCB1-205ENST00000417137 PPFIA4O75335 1185 aa26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 SETQ01105 290 aaPredicted RBP26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 HABP4Q5JVS0 413 aaKnown RBP26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 CYFIP1Q7L576 1253 aa26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 SNX21Q969T3 373 aa26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 MTG1Q9BT17 334 aaPredicted RBP26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 SEZ6LQ9BYH1 1024 aa26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 KIAA1217Q5T5P2 1943 aa26.26■■□□□ 1.79
SMARCB1-205ENST00000417137 FAM86B1E9PN63 330 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 NOP56O00567 594 aaKnown RBP26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 EVI5O60447 810 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 MMP3P08254 477 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 FAM86B2P0C5J1 330 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 C1orf53Q5VUE5 145 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 DIS3L2Q8IYB7 885 aaKnown RBP26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 FBXO18Q8NFZ0 1043 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 OXER1Q8TDS5 423 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 SDF4Q9BRK5 362 aa26.25■■□□□ 1.79
SMARCB1-205ENST00000417137 A0A0U1RQG5 324 aaPredicted RBP26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 SORBS3O60504 671 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 ATP9AO75110 1047 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 ARP10275 920 aa26.24■■□□□ 1.79
SMARCB1-205ENST00000417137 KCNA2P16389 499 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms