RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 SOWAHBA6NEL2 793 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 DYNC1LI2O43237 492 aaPredicted RBP15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 PTGS1P23219 599 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 FOSBP53539 338 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 TRIM22Q8IYM9 498 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 SPRYD3Q8NCJ5 442 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 GPKOWQ92917 476 aaPredicted RBP eCLIP15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 RNF26Q9BY78 433 aaPredicted RBP15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 TRPV6Q9H1D0 765 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 SEC63Q9UGP8 760 aaKnown RBP15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 GRIN2DO15399 1336 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 XIRP2A4UGR9 3374 aa15.92■□□□□ 0.14
THUMPD3-203ENST00000417036 TANC1Q9C0D5 1861 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 B4GALT4O60513 344 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 PPP1R11O60927 126 aaPredicted RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 HSP90AA1P07900 732 aaKnown RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 ALAS1P13196 640 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 SMPD1P17405 629 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 RABGGTBP53611 331 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 SSRP1Q08945 709 aaKnown RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 TKFCQ3LXA3 575 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 PPP2R2DQ66LE6 453 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 FBXO16Q8IX29 292 aaPredicted RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 MICALL1Q8N3F8 863 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 SMARCC2Q8TAQ2 1214 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 MTMR8Q96EF0 704 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 AIFM3Q96NN9 605 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 SEZ6LQ9BYH1 1024 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 WNT8AQ9H1J5 351 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 SLC4A7Q9Y6M7 1214 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 DDX49Q9Y6V7 483 aaKnown RBP15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 ZNF536O15090 1300 aa15.91■□□□□ 0.14
THUMPD3-203ENST00000417036 TRIP12Q14669 1992 aaPredicted RBP15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 SCN10AQ9Y5Y9 1956 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 ZBBXA8MT70 800 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 ZBTB5O15062 677 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 SMARCA1P28370 1054 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 PSMC6P62333 389 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 AKAP17AQ02040 695 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 USH1GQ495M9 461 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 WWC2Q6AWC2 1192 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 EEPD1Q7L9B9 569 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 HEATR3Q7Z4Q2 680 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 RPUSD2Q8IZ73 545 aaKnown RBP15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 PDGFCQ9NRA1 345 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 V9GY48 417 aaPredicted RBP15.9■□□□□ 0.14
THUMPD3-203ENST00000417036 PRPF3O43395 683 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 DEXIO95424 95 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 SCG2P13521 617 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 FDPSP14324 419 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 MYOGP15173 224 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 GJB2P29033 226 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 HMGN5P82970 282 aaKnown RBP15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 PKN1Q16512 942 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 PFKFB3Q16875 520 aaPredicted RBP15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 IQSEC1Q6DN90 963 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 SCLYQ96I15 445 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 CCPG1Q9ULG6 757 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 PCDHA11Q9Y5I1 949 aa15.89■□□□□ 0.13
THUMPD3-203ENST00000417036 MYH15Q9Y2K3 1946 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 TET1Q8NFU7 2136 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 PNMA6FA0A0J9YX94 578 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 ICAM1P05362 532 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 ATP2A2P16615 1042 aaKnown RBP15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 MUM1L1Q5H9M0 696 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 TMEM63BQ5T3F8 832 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 TAPT1Q6NXT6 567 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 NSMFQ6X4W1 530 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 FBXO11Q86XK2 927 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 Q9Y3F1 56 aa15.88■□□□□ 0.13
THUMPD3-203ENST00000417036 STXBP3O00186 592 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 TYW1BQ6NUM6 668 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 FAM184AQ8NB25 1140 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 NECAB3Q96P71 396 aaPredicted RBP15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 ALG1Q9BT22 464 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 AMNQ9BXJ7 453 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 VPS54Q9P1Q0 977 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 PTPRSQ13332 1948 aa15.87■□□□□ 0.13
THUMPD3-203ENST00000417036 BRWD1Q9NSI6 2320 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 PFKMP08237 780 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 NAPAP54920 295 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 TTLL4Q14679 1199 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 SKIV2LQ15477 1246 aaKnown RBP15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 VWCEQ96DN2 955 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 GJB4Q9NTQ9 266 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 PCDHA1Q9Y5I3 950 aa15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 COL4A4P53420 1690 aaPredicted RBP15.86■□□□□ 0.13
THUMPD3-203ENST00000417036 hCG_1984214I3L0E3 225 aa15.85■□□□□ 0.13
THUMPD3-203ENST00000417036 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms