RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 PAK2Q13177 524 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 ARSHQ5FYA8 562 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 CDKAL1Q5VV42 579 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 FBXW10Q5XX13 1052 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 MFSD4AQ8N468 514 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 CYB5D2Q8WUJ1 264 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 FAM168AQ92567 244 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 HSPA12BQ96MM6 686 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 ASAP1Q9ULH1 1129 aa7.13□□□□□ -1.27
CSTF1-202ENST00000415828 SPTBN4Q9H254 2564 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 ETV3P41162 512 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 SLITRK4Q8IW52 837 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 BAHD1Q8TBE0 780 aaPredicted RBP7.12□□□□□ -1.27
CSTF1-202ENST00000415828 KIF2CQ99661 725 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 CCSER2Q9H7U1 834 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 SEMA3GQ9NS98 782 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 GMIPQ9P107 970 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 CEP131Q9UPN4 1083 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 C5orf42Q9H799 3197 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 KDM3BQ7LBC6 1761 aa7.12□□□□□ -1.27
CSTF1-202ENST00000415828 TCF20Q9UGU0 1960 aaKnown RBP7.11□□□□□ -1.27
CSTF1-202ENST00000415828 TTC21BQ7Z4L5 1316 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 SLC22A31A6NKX4 558 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 H3BS24 57 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 C8AP07357 584 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF865P0CJ78 1059 aaPredicted RBP7.11□□□□□ -1.27
CSTF1-202ENST00000415828 RAG1P15918 1043 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 GBP1P32455 592 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 OVOS1Q6IE37 1185 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 SLFN12Q8IYM2 578 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 REXO1Q8N1G1 1221 aaKnown RBP7.11□□□□□ -1.27
CSTF1-202ENST00000415828 DNAJB8Q8NHS0 232 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF622Q969S3 477 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSTF1-202ENST00000415828 CCDC74BQ96LY2 380 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 FERD3LQ96RJ6 166 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 EHMT1Q9H9B1 1298 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 ATP13A1Q9HD20 1204 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 CAPN6Q9Y6Q1 641 aa7.11□□□□□ -1.27
CSTF1-202ENST00000415828 KDRP35968 1356 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 USP42Q9H9J4 1324 aaKnown RBP7.1□□□□□ -1.27
CSTF1-202ENST00000415828 E9PSI1 815 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 H0YIN7 160 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 RPS6KA4O75676 772 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ATE1O95260 518 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 TCF3P15923 654 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ERCC5P28715 1186 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF648Q5T619 568 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-202ENST00000415828 RGMBQ6NW40 437 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 C22orf34Q6ZV56 151 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ACBD3Q9H3P7 528 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 R3HDMLQ9H3Y0 253 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ANTXR1Q9H6X2 564 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 CARS2Q9HA77 564 aaKnown RBP7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ZNF277Q9NRM2 450 aaPredicted RBP7.1□□□□□ -1.27
CSTF1-202ENST00000415828 INPP5FQ9Y2H2 1132 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 ZSWIM8A7E2V4 1837 aa7.1□□□□□ -1.27
CSTF1-202ENST00000415828 WTIPA6NIX2 430 aaPredicted RBP7.09□□□□□ -1.27
CSTF1-202ENST00000415828 CYP27B1O15528 508 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 INTS3Q68E01 1043 aaKnown RBP7.09□□□□□ -1.27
CSTF1-202ENST00000415828 OLFM4Q6UX06 510 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 GPC2Q8N158 579 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 USHBP1Q8N6Y0 703 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 PPP1R13LQ8WUF5 828 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 GPRASP2Q96D09 838 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 TGIF2Q9GZN2 237 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 PPT2Q9UMR5 302 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 ST14Q9Y5Y6 855 aa7.09□□□□□ -1.27
CSTF1-202ENST00000415828 ZFHX4Q86UP3 3567 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 FZD9O00144 591 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 POLR2BP30876 1174 aaKnown RBP7.08□□□□□ -1.28
CSTF1-202ENST00000415828 RAD51AP2Q09MP3 1159 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 CCDC81Q6ZN84 652 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 TMEM40Q8WWA1 233 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 DPF3Q92784 378 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 ATG4CQ96DT6 458 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 GUCD1Q96NT3 240 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 GINM1Q9NU53 330 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 LMCD1Q9NZU5 365 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 CTNND2Q9UQB3 1225 aa7.08□□□□□ -1.28
CSTF1-202ENST00000415828 KMT2BQ9UMN6 2715 aaPredicted RBP7.08□□□□□ -1.28
CSTF1-202ENST00000415828 SMG6Q86US8 1419 aaKnown RBP7.08□□□□□ -1.28
CSTF1-202ENST00000415828 RPTORQ8N122 1335 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 FAM86C2PA6NEL3 165 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 RGS13O14921 159 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 LRRN2O75325 713 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 KIR3DL1P43629 444 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 NFIXQ14938 502 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 LRRFIP1Q32MZ4 808 aaKnown RBP7.07□□□□□ -1.28
CSTF1-202ENST00000415828 NLRC3Q7RTR2 1065 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 ZSWIM9Q86XI8 627 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 UBE2FQ969M7 185 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 COX4I2Q96KJ9 171 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 KREMEN1Q96MU8 473 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 SETXQ7Z333 2677 aaKnown RBP7.07□□□□□ -1.28
CSTF1-202ENST00000415828 TAF1P21675 1872 aa7.07□□□□□ -1.28
CSTF1-202ENST00000415828 ZDBF2Q9HCK1 2354 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 CD163L1Q9NR16 1453 aa7.06□□□□□ -1.28
CSTF1-202ENST00000415828 DNAH12Q6ZR08 3092 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms