RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 FAM117BQ6P1L5 589 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 RETREG2Q8NC44 543 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 SNX21Q969T3 373 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 SEZ6LQ9BYH1 1024 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 SENP2Q9HC62 589 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 GPCPD1Q9NPB8 672 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 SYNPO2Q9UMS6 1093 aa19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 RBM19Q9Y4C8 960 aaKnown RBP19.24■□□□□ 0.67
CDC42EP1-202ENST00000415670 C5orf42Q9H799 3197 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 PLA2G6O60733 806 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 CD2BP2O95400 341 aaKnown RBP19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 ICAM1P05362 532 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 IL9P15248 144 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 EVCP57679 992 aa19.23■□□□□ 0.67
CDC42EP1-202ENST00000415670 NBNO60934 754 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 TOP1P11387 765 aaKnown RBP19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 CPT1AP50416 773 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 APOBRQ0VD83 1088 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 CCDC96Q2M329 555 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 TBC1D5Q92609 795 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 TMEM47Q9BQJ4 181 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 ARIH1Q9Y4X5 557 aaPredicted RBP19.22■□□□□ 0.67
CDC42EP1-202ENST00000415670 TRIOO75962 3097 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 CCDC69A6NI79 296 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 KIF28PB7ZC32 967 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 PITPNM1O00562 1244 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 RFC2P35250 354 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 PTGISQ16647 500 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 NFRKBQ6P4R8 1299 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 NFXL1Q6ZNB6 911 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 WNT8BQ93098 351 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 LARP6Q9BRS8 491 aaKnown RBP19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 BRPF3Q9ULD4 1205 aa19.21■□□□□ 0.67
CDC42EP1-202ENST00000415670 KLF18A0A0U1RQI7 1052 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 A6NJR5 290 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 KCNA5P22460 613 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZNF200P98182 395 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 FAM178BQ8IXR5 827 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 AFG1LQ8WV93 481 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 KAT2BQ92831 832 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZNF274Q96GC6 653 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 UIMC1Q96RL1 719 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZBED2Q9BTP6 218 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 CPVLQ9H3G5 476 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 UBE2ZQ9H832 354 aaPredicted RBP19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 TPCN1Q9ULQ1 816 aa19.2■□□□□ 0.66
CDC42EP1-202ENST00000415670 PIEZO1Q92508 2521 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 LINC01553A4QN01 128 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 TXNP10599 105 aaKnown RBP19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 ANP32AP39687 249 aaKnown RBP19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 HIC1Q14526 733 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 LY6KQ17RY6 165 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 SYDE2Q5VT97 1194 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 CATIPQ7Z7H3 387 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZNF654Q8IZM8 581 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 PNMA1Q8ND90 353 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZSCAN31Q96LW9 406 aaPredicted RBP19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 C17orf80Q9BSJ5 609 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
CDC42EP1-202ENST00000415670 DDAH1O94760 285 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 KCNJ6P48051 423 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 RCAN1P53805 252 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 PDE4DQ08499 809 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 MBTPS1Q14703 1052 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 PPP2R5BQ15173 497 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 SYNE3Q6ZMZ3 975 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 HSCBQ8IWL3 235 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 GJD3Q8N144 294 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 OSBPL7Q9BZF2 842 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 ADD3Q9UEY8 706 aaKnown RBP19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 NOD1Q9Y239 953 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 NID2Q14112 1375 aa19.18■□□□□ 0.66
CDC42EP1-202ENST00000415670 ZBTB43O43298 467 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 LARGE1O95461 756 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 CALM1P0DP23 149 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 CALM2P0DP24 149 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 CALM3P0DP25 149 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 EDNRBP24530 442 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 PDIA3P30101 505 aaKnown RBP19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 ERVK-21P61565 698 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 TROAPQ12815 778 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 BFSP2Q13515 415 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 TRAF7Q6Q0C0 670 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 BTNL9Q6UXG8 535 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 RNF207Q6ZRF8 634 aa19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
CDC42EP1-202ENST00000415670 MYO7AQ13402 2215 aa19.16■□□□□ 0.66
CDC42EP1-202ENST00000415670 MYH6P13533 1939 aa19.16■□□□□ 0.66
CDC42EP1-202ENST00000415670 GOLGA8BA8MQT2 603 aa19.16■□□□□ 0.66
CDC42EP1-202ENST00000415670 H3BQ06 376 aaPredicted RBP19.16■□□□□ 0.66
CDC42EP1-202ENST00000415670 K7ELQ4 463 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms