RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 GPCPD1Q9NPB8 672 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CLIC4Q9Y696 253 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 GJA3Q9Y6H8 435 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ENC1O14682 589 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 OPLAHO14841 1288 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 LINGO3P0C6S8 592 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 GOLGA8HP0CJ92 632 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CASP14P31944 242 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 GBP1P32455 592 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 SH2D4BQ5SQS7 431 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CDK5RAP3Q96JB5 506 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 FAM167BQ9BTA0 163 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 BCS1LQ9Y276 419 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 EPN1Q9Y6I3 576 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 RTL9Q8NET4 1388 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 MED23Q9ULK4 1368 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CCT8L1PA6NM43 557 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 GCOM1H8Y6P7 765 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 SEMA3EO15041 775 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 NPTXRO95502 500 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 MYZAPP0CAP1 466 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 IDEP14735 1019 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ERCC5P28715 1186 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 CACNB3P54284 484 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 POLE2P56282 527 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 USP4Q13107 963 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 CCDC178Q5BJE1 867 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 KANK3Q6NY19 840 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 APBB1IPQ7Z5R6 666 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 MKL1Q969V6 931 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
SIK3-203ENST00000415541 PCDHA5Q9Y5H7 936 aa8.58□□□□□ -1.04
SIK3-203ENST00000415541 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ADAMTS7Q9UKP4 1686 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 HIP1RO75146 1068 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 C8orf74Q6P047 294 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CD302Q8IX05 232 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 SLC44A5Q8NCS7 719 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 LZICQ8WZA0 190 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 TEKT1Q969V4 418 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ZHX3Q9H4I2 956 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ZNHIT6Q9NWK9 470 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 STIM2Q9P246 746 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 HDAC9Q9UKV0 1011 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 NEDD4P46934 1319 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 N4BP3O15049 544 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 RAD17O75943 681 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 NPR1P16066 1061 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ATP2A2P16615 1042 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 ZNF18P17022 549 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CYLC1P35663 651 aaPredicted RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 NAPAP54920 295 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ITIH3Q06033 890 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 C2orf54Q08AI8 447 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 TSNAXIP1Q2TAA8 658 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 TBC1D1Q86TI0 1168 aaPredicted RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 COL23A1Q86Y22 540 aaPredicted RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 CCDC155Q8N6L0 562 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 SH3RF3Q8TEJ3 882 aaPredicted RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 RRP36Q96EU6 259 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 ATP8A2Q9NTI2 1148 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 SLC5A4Q9NY91 659 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 TCEAL9Q9UHQ7 104 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 BTBD18B2RXH4 712 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ATP1A1P05023 1023 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 MYL1P05976 194 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CALM1P0DP23 149 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CALM2P0DP24 149 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 CALM3P0DP25 149 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ZNF174Q15697 407 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 EZH2Q15910 746 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 NAF1Q96HR8 494 aaKnown RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 SAMD15Q9P1V8 674 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ARPP21Q9UBL0 812 aaPredicted RBP8.57□□□□□ -1.04
SIK3-203ENST00000415541 L3MBTL1Q9Y468 752 aa8.57□□□□□ -1.04
SIK3-203ENST00000415541 ZMYM6O95789 1325 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TRIM75PA6NK02 468 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 EVI5O60447 810 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 NMT2O60551 498 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 DEXIO95424 95 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 GNAQP50148 359 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 SPAG1Q07617 926 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 SLC39A14Q15043 492 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 ZYXQ15942 572 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 TRMT1LQ7Z2T5 733 aaKnown RBP8.56□□□□□ -1.04
SIK3-203ENST00000415541 LCA5Q86VQ0 697 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MAIP1Q8WWC4 291 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 ZNF570Q96NI8 536 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 C2CD2Q9Y426 696 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 ITIH6Q6UXX5 1313 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 SRGAP2O75044 1071 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 KRT14P02533 472 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 OATP04181 439 aa8.56□□□□□ -1.04
SIK3-203ENST00000415541 MATR3P43243 847 aaKnown RBP eCLIP8.56□□□□□ -1.046e-7■■■□□ 18.6
SIK3-203ENST00000415541 AFMP43652 599 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms