RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 GOLGA6L4A6NEF3 574 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 GPR25O00155 361 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 IGHA2P01877 340 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 ARP10275 920 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 RGS2P41220 211 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 PSMC4P43686 418 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 MTMR1Q13613 665 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 KIF22Q14807 665 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 IGSF22Q8N9C0 903 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 AK8Q96MA6 479 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 CLIC6Q96NY7 704 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 RIT2Q99578 217 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 CSRNP2Q9H175 543 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 AGO4Q9HCK5 861 aaKnown RBP16.11■□□□□ 0.17
SF3B1-204ENST00000414963 PCDHA12Q9UN75 941 aa16.11■□□□□ 0.17
SF3B1-204ENST00000414963 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 IPO5O00410 1097 aaKnown RBP16.1■□□□□ 0.17
SF3B1-204ENST00000414963 PSMD10O75832 226 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
SF3B1-204ENST00000414963 TXKP42681 527 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 GRIN1Q05586 938 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 IRF5Q13568 498 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 RESP18Q5W5W9 173 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 OLFML2BQ68BL8 750 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 NPLOC4Q8TAT6 608 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 ZFP91Q96JP5 570 aaPredicted RBP16.1■□□□□ 0.17
SF3B1-204ENST00000414963 ZNF577Q9BSK1 485 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 TTC12Q9H892 705 aaPredicted RBP16.1■□□□□ 0.17
SF3B1-204ENST00000414963 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 PLXNB2O15031 1838 aa16.1■□□□□ 0.17
SF3B1-204ENST00000414963 DHX15O43143 795 aaKnown RBP16.09■□□□□ 0.17
SF3B1-204ENST00000414963 MARCH6O60337 910 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 GNRH1P01148 92 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 TGFB3P10600 412 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 SEMA3FQ13275 785 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 TMEM266Q2M3C6 531 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 SKOR2Q2VWA4 1001 aaPredicted RBP16.09■□□□□ 0.17
SF3B1-204ENST00000414963 KCNV1Q6PIU1 500 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 B3GNT9Q6UX72 402 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 ARMCX2Q7L311 632 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 APBA2Q99767 749 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 TINF2Q9BSI4 451 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 RAB34Q9BZG1 259 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 TBC1D22BQ9NU19 505 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 WBP1LQ9NX94 342 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 VAV3Q9UKW4 847 aa16.09■□□□□ 0.17
SF3B1-204ENST00000414963 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
SF3B1-204ENST00000414963 ZNFX1Q9P2E3 1918 aaKnown RBP16.09■□□□□ 0.17
SF3B1-204ENST00000414963 MBD3O95983 291 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 TECP42680 631 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 PPP2R5CQ13362 524 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 OTOP1Q7RTM1 612 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 MRPS27Q92552 414 aaKnown RBP16.08■□□□□ 0.16
SF3B1-204ENST00000414963 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 KATNBL1Q9H079 304 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 VTA1Q9NP79 307 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 HPSEQ9Y251 543 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 NFASCO94856 1347 aa16.08■□□□□ 0.16
SF3B1-204ENST00000414963 RBM47A0AV96 593 aaKnown RBP16.07■□□□□ 0.16
SF3B1-204ENST00000414963 SLC26A4O43511 780 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 FKTNO75072 461 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 ATP9AO75110 1047 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 SNAI1O95863 264 aaPredicted RBP16.07■□□□□ 0.16
SF3B1-204ENST00000414963 KCNA2P16389 499 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 HOXD10P28358 340 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 CAP1Q01518 475 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 ITGB3BPQ13352 177 aaPredicted RBP16.07■□□□□ 0.16
SF3B1-204ENST00000414963 ARHGEF6Q15052 776 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 FSIP1Q8NA03 581 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 ENGASEQ8NFI3 743 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 GPT2Q8TD30 523 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 GJA10Q969M2 543 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 ERO1AQ96HE7 468 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 BEGAINQ9BUH8 593 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 CCSER1Q9C0I3 900 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
SF3B1-204ENST00000414963 STK24Q9Y6E0 443 aa16.07■□□□□ 0.16
SF3B1-204ENST00000414963 GAS7O60861 476 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 SEPT14Q6ZU15 432 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
SF3B1-204ENST00000414963 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
SF3B1-204ENST00000414963 SYMPKQ92797 1274 aaKnown RBP16.06■□□□□ 0.16
SF3B1-204ENST00000414963 EPSTI1Q96J88 318 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 ABHD16BQ9H3Z7 469 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 GOLPH3LQ9H4A5 285 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 FAM13BQ9NYF5 915 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 LRWD1Q9UFC0 647 aa16.06■□□□□ 0.16
SF3B1-204ENST00000414963 A0A1B0GVL5 298 aa16.05■□□□□ 0.16
SF3B1-204ENST00000414963 PFKFB1P16118 471 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms