RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
HDAC9-206ENST00000413380 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
HDAC9-206ENST00000413380 SLC37A4O43826 429 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 RGS20O76081 388 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 ITGB5P18084 799 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 UBXN2AP68543 259 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 PTGDRQ13258 359 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 ARHGEF6Q15052 776 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 STXBP2Q15833 593 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 DPP9Q86TI2 863 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 NPLOC4Q8TAT6 608 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 ZNF296Q8WUU4 475 aaPredicted RBP13.16□□□□□ -0.3
HDAC9-206ENST00000413380 LEO1Q8WVC0 666 aaPredicted RBP13.16□□□□□ -0.3
HDAC9-206ENST00000413380 CHAMP1Q96JM3 812 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 GBP4Q96PP9 640 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
HDAC9-206ENST00000413380 TFIP11Q9UBB9 837 aaKnown RBP13.16□□□□□ -0.3
HDAC9-206ENST00000413380 RBM47A0AV96 593 aaKnown RBP13.15□□□□□ -0.3
HDAC9-206ENST00000413380 MCM7P33993 719 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 PRMT2P55345 433 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 ZNF174Q15697 407 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 ARMCX2Q7L311 632 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 TRMT44Q8IYL2 757 aaKnown RBP13.15□□□□□ -0.3
HDAC9-206ENST00000413380 CYP2W1Q8TAV3 490 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 HAS1Q92839 578 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 CDHR1Q96JP9 859 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 TINF2Q9BSI4 451 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 SRRDQ9UH36 339 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 CNPY2Q9Y2B0 182 aa13.15□□□□□ -0.3
HDAC9-206ENST00000413380 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SPTLC2O15270 562 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FIBPO43427 364 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 OR52Z1P0C646 297 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 TGFB3P10600 412 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-206ENST00000413380 ATP2B1P20020 1258 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 HOXD10P28358 340 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 ZNF76P36508 570 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FLT3LGP49771 235 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 PRKCZQ05513 592 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 PDE4DQ08499 809 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 STK38Q15208 465 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 CSPP1Q1MSJ5 1256 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FOXD4L6Q3SYB3 417 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-206ENST00000413380 PRR16Q569H4 304 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FOXD4L3Q6VB84 417 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-206ENST00000413380 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 PLA2G4DQ86XP0 818 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SLFN12Q8IYM2 578 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SLC5A5Q92911 643 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FERMT2Q96AC1 680 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SENP7Q9BQF6 1050 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 VTA1Q9NP79 307 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 KCNH7Q9NS40 1196 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 NRBP1Q9UHY1 535 aa13.14□□□□□ -0.31
HDAC9-206ENST00000413380 FBXO2Q9UK22 296 aaPredicted RBP13.14□□□□□ -0.31
HDAC9-206ENST00000413380 SRPRBQ9Y5M8 271 aaKnown RBP13.14□□□□□ -0.31
HDAC9-206ENST00000413380 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 CENPFP49454 3210 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 MSH4O15457 936 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 PSMD10O75832 226 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 SNAI1O95863 264 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-206ENST00000413380 MTMR1Q13613 665 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 CALCRLQ16602 461 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-206ENST00000413380 KCNV1Q6PIU1 500 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 RIT2Q99578 217 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 WDR11Q9BZH6 1224 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 ABHD16BQ9H3Z7 469 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 AGO4Q9HCK5 861 aaKnown RBP13.13□□□□□ -0.31
HDAC9-206ENST00000413380 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.13□□□□□ -0.31
HDAC9-206ENST00000413380 FLRT1Q9NZU1 646 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 GABRQQ9UN88 632 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 NFASCO94856 1347 aa13.13□□□□□ -0.31
HDAC9-206ENST00000413380 MYH9P35579 1960 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 FRMPD3Q5JV73 1810 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 IPO5O00410 1097 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 ARP10275 920 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 PYGBP11216 843 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 KCNA2P16389 499 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 CYP2B6P20813 491 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 IL17AQ16552 155 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 TAPT1Q6NXT6 567 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 IGSF22Q8N9C0 903 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 PXYLP1Q8TE99 480 aa13.12□□□□□ -0.31
HDAC9-206ENST00000413380 DDX49Q9Y6V7 483 aaKnown RBP13.12□□□□□ -0.31
HDAC9-206ENST00000413380 FAM237AA0A1B0GTK4 181 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms