RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 PWP2Q15269 919 aaKnown RBP29.37■■■□□ 2.29
RHBDD3-203ENST00000413137 KCNG4Q8TDN1 519 aa29.37■■■□□ 2.29
RHBDD3-203ENST00000413137 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.37■■■□□ 2.29
RHBDD3-203ENST00000413137 SRRDQ9UH36 339 aa29.37■■■□□ 2.29
RHBDD3-203ENST00000413137 MCM3APO60318 1980 aa29.37■■■□□ 2.29
RHBDD3-203ENST00000413137 B4DLN1 442 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 ATP9AO75110 1047 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 PPP6R2O75170 966 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 PRPF40AO75400 957 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 TXKP42681 527 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 MPHOSPH6Q99547 160 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 KATNBL1Q9H079 304 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 AGO4Q9HCK5 861 aaKnown RBP29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 PDGFCQ9NRA1 345 aa29.36■■■□□ 2.29
RHBDD3-203ENST00000413137 GADD45BO75293 160 aaPredicted RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 STAM2O75886 525 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 ME1P48163 572 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 SETQ01105 290 aaPredicted RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 TMEM87AQ8NBN3 555 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 GPRASP2Q96D09 838 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 BCAS3Q9H6U6 928 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 SPATA31C2B4DYI2 1134 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 LAD1O00515 517 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 XRCC5P13010 732 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 CYP2C19P33261 490 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 MCM4P33991 863 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 PRAMEF19Q5SWL8 479 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 AXDND1Q5T1B0 1012 aaPredicted RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 NLRX1Q86UT6 975 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 ZNF577Q9BSK1 485 aa29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 SRPRBQ9Y5M8 271 aaKnown RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 MORC2Q9Y6X9 1032 aaPredicted RBP29.35■■■□□ 2.29
RHBDD3-203ENST00000413137 ELP1O95163 1332 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 VWA3AA6NCI4 1184 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 SP2Q02086 613 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 ITGB3BPQ13352 177 aaPredicted RBP29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 TMEM63BQ5T3F8 832 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 OLFML2BQ68BL8 750 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 KRI1Q8N9T8 703 aaKnown RBP29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 TRIB2Q92519 343 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 SLC5A5Q92911 643 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 SYNGAP1Q96PV0 1343 aa29.34■■■□□ 2.29
RHBDD3-203ENST00000413137 IPO5O00410 1097 aaKnown RBP29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 TBX3O15119 743 aa29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 PRPHP41219 470 aa29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 SPECC1Q5M775 1068 aa29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 ARL6IP4Q66PJ3 421 aaKnown RBP29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 TAPT1Q6NXT6 567 aa29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 TTC12Q9H892 705 aaPredicted RBP29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 LMBRD1Q9NUN5 540 aa29.33■■■□□ 2.29
RHBDD3-203ENST00000413137 FOXN1O15353 648 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 MARCH6O60337 910 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 ARIH2O95376 493 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 ICAM3P32942 547 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 TECP42680 631 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 GNPTABQ3T906 1256 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 DTHD1Q6ZMT9 781 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 MSL3Q8N5Y2 521 aaKnown RBP29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 CSRNP2Q9H175 543 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 HTTP42858 3142 aa29.32■■■□□ 2.28
RHBDD3-203ENST00000413137 DHX15O43143 795 aaKnown RBP29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 PTGS1P23219 599 aa29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 HOXD10P28358 340 aa29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 FERMT2Q96AC1 680 aa29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 FAM20AQ96MK3 541 aa29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 CASP8AP2Q9UKL3 1982 aa29.31■■■□□ 2.28
RHBDD3-203ENST00000413137 PSMD10O75832 226 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 KCNA2P16389 499 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 OTOP1Q7RTM1 612 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 SLFN12Q8IYM2 578 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 SORBS3O60504 671 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 GNRH1P01148 92 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 ELNP15502 786 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 TRIM32Q13049 653 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 ACVR2BQ13705 512 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 LY6KQ17RY6 165 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 LRCH2Q5VUJ6 765 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 SHC4Q6S5L8 630 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 USP49Q70CQ1 688 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 VTA1Q9NP79 307 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 VAV3Q9UKW4 847 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 PCDHA12Q9UN75 941 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 TELO2Q9Y4R8 837 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 TRIM17Q9Y577 477 aa29.3■■■□□ 2.28
RHBDD3-203ENST00000413137 PP2D1A8MPX8 630 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 DDX39AO00148 427 aaKnown RBP29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 MAFGO15525 162 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 CUTAO60888 179 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 HSPA8P11142 646 aaKnown RBP29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 CDC25AP30304 524 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 SPIRE1Q08AE8 756 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 IRF5Q13568 498 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 CSPP1Q1MSJ5 1256 aa29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 ZHX1Q9UKY1 873 aaPredicted RBP29.29■■■□□ 2.28
RHBDD3-203ENST00000413137 CENPFP49454 3210 aa29.28■■■□□ 2.28
RHBDD3-203ENST00000413137 POTEMA6NI47 508 aa29.28■■■□□ 2.28
RHBDD3-203ENST00000413137 FXR2P51116 673 aaKnown RBP eCLIP29.28■■■□□ 2.28
RHBDD3-203ENST00000413137 CCDC62Q6P9F0 684 aa29.28■■■□□ 2.28
RHBDD3-203ENST00000413137 CDHR1Q96JP9 859 aa29.28■■■□□ 2.28
RHBDD3-203ENST00000413137 ABHD16BQ9H3Z7 469 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms