RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 POTEB3A0JP26 581 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 POTECB2RU33 542 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 HLA-DOAP06340 250 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 STAT3P40763 770 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 NFIAQ12857 509 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 COASYQ13057 564 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 MAP9Q49MG5 647 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 PAPD7Q5XG87 772 aaKnown RBP15.31■□□□□ 0.04
NUB1-201ENST00000413040 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 POTEBQ6S5H4 581 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 LEKR1Q6ZMV7 388 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 FAM170AA1A519 330 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.043e-7■□□□□ 9.1
NUB1-201ENST00000413040 POLR2FP61218 127 aaKnown RBP15.31■□□□□ 0.04
NUB1-201ENST00000413040 EZH2Q15910 746 aaKnown RBP15.31■□□□□ 0.04
NUB1-201ENST00000413040 KIAA0825Q8IV33 1275 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 FGFBP2Q9BYJ0 223 aa15.31■□□□□ 0.04
NUB1-201ENST00000413040 EDIL3O43854 480 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 USH1GQ495M9 461 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 GPBP1Q86WP2 473 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 CERS5Q8N5B7 392 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 NRAPQ86VF7 1730 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 MEIS1O00470 390 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 SLC1A4P43007 532 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 RAPGEF1Q13905 1077 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 EXOC4Q96A65 974 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 ALS2CR12Q96Q35 445 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 SIK3Q9Y2K2 1263 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 PCDHA1Q9Y5I3 950 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 TNRC6CQ9HCJ0 1690 aaKnown RBP15.3■□□□□ 0.04
NUB1-201ENST00000413040 PPEF1O14829 653 aaPredicted RBP15.3■□□□□ 0.04
NUB1-201ENST00000413040 TUBBP07437 444 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 MYBL2P10244 700 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 FKBP3Q00688 224 aaKnown RBP15.3■□□□□ 0.04
NUB1-201ENST00000413040 PTPROQ16827 1216 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 HAS1Q92839 578 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 FAM163AQ96GL9 167 aaPredicted RBP15.3■□□□□ 0.04
NUB1-201ENST00000413040 LSM14BQ9BX40 385 aaKnown RBP15.3■□□□□ 0.04
NUB1-201ENST00000413040 TSGA10Q9BZW7 698 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
NUB1-201ENST00000413040 GAKO14976 1311 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 TAL1P17542 331 aaPredicted RBP15.29■□□□□ 0.04
NUB1-201ENST00000413040 SMARCA1P28370 1054 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 LRRC63Q05C16 580 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 FAM204AQ9H8W3 233 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 RIC8AQ9NPQ8 531 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 ZBTB5O15062 677 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 DDR1Q08345 913 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 SEMA3FQ13275 785 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 PDIA5Q14554 519 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 C15orf52Q6ZUT6 534 aaKnown RBP15.29■□□□□ 0.04
NUB1-201ENST00000413040 HDAC7Q8WUI4 952 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 LRRC27Q9C0I9 530 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 TMX4Q9H1E5 349 aaPredicted RBP15.29■□□□□ 0.04
NUB1-201ENST00000413040 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
NUB1-201ENST00000413040 COL4A3BPQ9Y5P4 624 aa15.29■□□□□ 0.04
NUB1-201ENST00000413040 PAFAH1B1P43034 410 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 CRY2Q49AN0 593 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 PRR16Q569H4 304 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 SND1Q7KZF4 910 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUB1-201ENST00000413040 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 RNF40O75150 1001 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 PLA2G4BP0C869 781 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 TCERG1LQ5VWI1 586 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 IQCEQ6IPM2 695 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 WDR93Q6P2C0 686 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 LRRC1Q9BTT6 524 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 SNX12Q9UMY4 172 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 POTEIP0CG38 1075 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 MCM3P25205 808 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 SHMT1P34896 483 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 CYP4A11Q02928 519 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 GABPAQ06546 454 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 PABPC4Q13310 644 aaKnown RBP eCLIP15.28■□□□□ 0.04
NUB1-201ENST00000413040 FIGNQ5HY92 759 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 CDC42EP5Q6NZY7 148 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 POTEGQ6S5H5 508 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 POTEEQ6S8J3 1075 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
NUB1-201ENST00000413040 SALL4Q9UJQ4 1053 aa15.28■□□□□ 0.04
NUB1-201ENST00000413040 EP400Q96L91 3159 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 NAV1Q8NEY1 1877 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 ANO9A1A5B4 782 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 hCG_1984214I3L0E3 225 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 ZNF713Q8N859 430 aaPredicted RBP15.27■□□□□ 0.04
NUB1-201ENST00000413040 KCNQ5Q9NR82 932 aa15.27■□□□□ 0.04
NUB1-201ENST00000413040 ADAM9Q13443 819 aa15.27■□□□□ 0.03
NUB1-201ENST00000413040 SLC9C1Q4G0N8 1177 aa15.27■□□□□ 0.03
NUB1-201ENST00000413040 GPATCH4Q5T3I0 446 aaKnown RBP15.27■□□□□ 0.03
NUB1-201ENST00000413040 SFMBT2Q5VUG0 894 aa15.27■□□□□ 0.03
NUB1-201ENST00000413040 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms