RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 RNF180Q86T96 592 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 NLRX1Q86UT6 975 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 CYP2W1Q8TAV3 490 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 GPRASP2Q96D09 838 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 MXRA8Q9BRK3 442 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 SPC25Q9HBM1 224 aa15.91■□□□□ 0.14
CPNE1-206ENST00000412056 SCN10AQ9Y5Y9 1956 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 FAM205CA6NFA0 338 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 SPATA31C2B4DYI2 1134 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 EDIL3O43854 480 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 GGPS1O95749 300 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 CYP3A4P08684 503 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 RGS19P49795 217 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 ARHGAP1Q07960 439 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 NR5A1Q13285 461 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 NONOQ15233 471 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPNE1-206ENST00000412056 KCNA10Q16322 511 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 FSCN1Q16658 493 aaKnown RBP15.9■□□□□ 0.14
CPNE1-206ENST00000412056 GNASQ5JWF2 1037 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 CCSAPQ6IQ19 270 aaPredicted RBP15.9■□□□□ 0.14
CPNE1-206ENST00000412056 KCNV1Q6PIU1 500 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 KRT25Q7Z3Z0 450 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 NECAB2Q7Z6G3 386 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 DIS3L2Q8IYB7 885 aaKnown RBP15.9■□□□□ 0.14
CPNE1-206ENST00000412056 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 TNFRSF25Q93038 417 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 C11orf49Q9H6J7 331 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 BCAS3Q9H6U6 928 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 JADE2Q9NQC1 790 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
CPNE1-206ENST00000412056 CCDC194A0A1B0GVG4 234 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 BTBD18B2RXH4 712 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 ARP10275 920 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 TGFB3P10600 412 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 COL6A1P12109 1028 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 ZNF76P36508 570 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 MTMR1Q13613 665 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 INF2Q27J81 1249 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 CEP55Q53EZ4 464 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 EARS2Q5JPH6 523 aaKnown RBP15.89■□□□□ 0.13
CPNE1-206ENST00000412056 CELF3Q5SZQ8 465 aaKnown RBP15.89■□□□□ 0.13
CPNE1-206ENST00000412056 PIK3AP1Q6ZUJ8 805 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 HSCBQ8IWL3 235 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 FERMT2Q96AC1 680 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 BRMS1Q9HCU9 246 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 PKD2L1Q9P0L9 805 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
CPNE1-206ENST00000412056 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
CPNE1-206ENST00000412056 IGLV3-22A0A075B6J6 115 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 ATP9AO75110 1047 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 KCNA2P16389 499 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 CIITAP33076 1130 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 ACLYP53396 1101 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 PLA2G4DQ86XP0 818 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 DHX37Q8IY37 1157 aaKnown RBP15.88■□□□□ 0.13
CPNE1-206ENST00000412056 PCSK9Q8NBP7 692 aaKnown RBP15.88■□□□□ 0.13
CPNE1-206ENST00000412056 FBXO18Q8NFZ0 1043 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 AFG1LQ8WV93 481 aa15.88■□□□□ 0.13
CPNE1-206ENST00000412056 TSEN34Q9BSV6 310 aaKnown RBP15.88■□□□□ 0.13
CPNE1-206ENST00000412056 SENP6Q9GZR1 1112 aaPredicted RBP15.88■□□□□ 0.13
CPNE1-206ENST00000412056 A0A1W2PQ45 241 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-206ENST00000412056 A0A1W2PQY0 241 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 MEIS1O00470 390 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 TDP2O95551 362 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 ASGR1P07306 291 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 MMP3P08254 477 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 NIPA1Q7RTP0 329 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 EMID1Q96A84 441 aaPredicted RBP15.87■□□□□ 0.13
CPNE1-206ENST00000412056 CDHR1Q96JP9 859 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 KCNH7Q9NS40 1196 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 KIF3AQ9Y496 699 aa15.87■□□□□ 0.13
CPNE1-206ENST00000412056 MYH9P35579 1960 aaKnown RBP15.86■□□□□ 0.13
CPNE1-206ENST00000412056 MOXD2PA6NHM9 499 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 A6NJR5 290 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 MYL3P08590 195 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 CPT1AP50416 773 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 USP11P51784 963 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 LAMC2Q13753 1193 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 NEDD9Q14511 834 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 SAFBQ15424 915 aaKnown RBP eCLIP15.86■□□□□ 0.131e-17■■■■□ 20.2
CPNE1-206ENST00000412056 PRR16Q569H4 304 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 CYFIP1Q7L576 1253 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 NEK8Q86SG6 692 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 LENG9Q96B70 501 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 SPATA33Q96N06 139 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 SENP7Q9BQF6 1050 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 MLXIPQ9HAP2 919 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 AGO4Q9HCK5 861 aaKnown RBP15.86■□□□□ 0.13
CPNE1-206ENST00000412056 TELO2Q9Y4R8 837 aa15.86■□□□□ 0.13
CPNE1-206ENST00000412056 KIF28PB7ZC32 967 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 MAFGO15525 162 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 ZEB2O60315 1214 aa15.85■□□□□ 0.13
CPNE1-206ENST00000412056 ATN1P54259 1190 aaPredicted RBP15.85■□□□□ 0.13
CPNE1-206ENST00000412056 SETQ01105 290 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms