RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 CUL4BQ13620 913 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 KCNB1Q14721 858 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 KRT79Q5XKE5 535 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 MAP1SQ66K74 1059 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 RNF207Q6ZRF8 634 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CYP2W1Q8TAV3 490 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 SNX29Q8TEQ0 813 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 GJA10Q969M2 543 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 C7orf25Q9BPX7 421 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 MXRA8Q9BRK3 442 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 UBIAD1Q9Y5Z9 338 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 TRAF5O00463 557 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CASP1P29466 404 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 PPP2R5CQ13362 524 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 TTLL12Q14166 644 aaPredicted RBP6.2□□□□□ -1.42
EPHA4-202ENST00000409854 PGM5Q15124 567 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 ECM1Q16610 540 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 GPAT2Q6NUI2 795 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 XRRA1Q6P2D8 792 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 KCTD17Q8N5Z5 321 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CHST13Q8NET6 341 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 IL31RAQ8NI17 732 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 NT5C3AQ9H0P0 336 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 HSD3B7Q9H2F3 369 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 ACAD9Q9H845 621 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 PXMP2Q9NR77 195 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 DACH1Q9UI36 760 aa6.2□□□□□ -1.42
EPHA4-202ENST00000409854 CNMDO75829 334 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RPN1P04843 607 aaKnown RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ITGB5P18084 799 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ZNF76P36508 570 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 STAT3P40763 770 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 MRPS9P82933 396 aaKnown RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 GADL1Q6ZQY3 521 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 FASTKD5Q7L8L6 764 aaKnown RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 PLA2G4DQ86XP0 818 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RIOX2Q8IUF8 465 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 LARP4BQ92615 738 aaKnown RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RAD54LQ92698 747 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 TAAR1Q96RJ0 339 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 PDCD2LQ9BRP1 358 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 TRIM9Q9C026 710 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RRAGCQ9HB90 399 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 HOMER2Q9NSB8 354 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RMND1Q9NWS8 449 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 SMTNL1A8MU46 457 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RHOBTB3O94955 611 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 MUTP22033 750 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RPA1P27694 616 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ERCC5P28715 1186 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 UBXN2AP68543 259 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ZNF658Q5TYW1 1059 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 HAUS3Q68CZ6 603 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 OTOP1Q7RTM1 612 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 KCNK18Q7Z418 384 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 STAMQ92783 540 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RIT2Q99578 217 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 POLR3CQ9BUI4 534 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ASCC2Q9H1I8 757 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 BLZF1Q9H2G9 400 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 JADE2Q9NQC1 790 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 CYP39A1Q9NYL5 469 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 BTBD7Q9P203 1132 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 CLEC11AQ9Y240 323 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 SLC45A1Q9Y2W3 748 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 PPP1R3GB7ZBB8 358 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 MARCH6O60337 910 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 MED24O75448 989 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ADCY5O95622 1261 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 SPATA31C1P0DKV0 1188 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ARP10275 920 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 MYL5Q02045 173 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 FMR1Q06787 632 aaKnown RBP eCLIP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 SNAPC2Q13487 334 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 BAATQ14032 418 aaPredicted RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 COBLL1Q53SF7 1204 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ISM2Q6H9L7 571 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 RASSF8Q8NHQ8 419 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 ERMNQ8TAM6 284 aa6.19□□□□□ -1.42
EPHA4-202ENST00000409854 A1CFQ9NQ94 594 aaKnown RBP6.19□□□□□ -1.42
EPHA4-202ENST00000409854 BECN2A8MW95 431 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 GOLGA6L19H0YKK7 550 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 PTMAP06454 111 aaKnown RBP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 CD44P16070 742 aaKnown RBP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 CCT6AP40227 531 aaKnown RBP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 HERVK_113P62684 666 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 AMPD3Q01432 767 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 EHHADHQ08426 723 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 PABPC4Q13310 644 aaKnown RBP eCLIP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 SV2BQ7L1I2 683 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 CDK5RAP3Q96JB5 506 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 MED15Q96RN5 788 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 PLIN2Q99541 437 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
EPHA4-202ENST00000409854 WDR11Q9BZH6 1224 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 LRRC27Q9C0I9 530 aa6.18□□□□□ -1.42
EPHA4-202ENST00000409854 FBXO40Q9UH90 709 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms