RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 LCNL1Q6ZST4 164 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 NLGN1Q8N2Q7 840 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 SMARCC2Q8TAQ2 1214 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.25□□□□□ -1.41
PMS1-203ENST00000409593 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 MRFAP1L1Q96HT8 127 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 KCNJ15Q99712 375 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 DHRS4Q9BTZ2 278 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 LNPKQ9C0E8 428 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 ZNF652Q9Y2D9 606 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 PCDHB4Q9Y5E5 795 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
PMS1-203ENST00000409593 KRIT1O00522 736 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 CACNB2Q08289 660 aaPredicted RBP6.24□□□□□ -1.41
PMS1-203ENST00000409593 LONRF2Q1L5Z9 754 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 VMACQ2NL98 169 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 MAMDC2Q7Z304 686 aaPredicted RBP6.24□□□□□ -1.41
PMS1-203ENST00000409593 B3GNT8Q7Z7M8 397 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.24□□□□□ -1.41
PMS1-203ENST00000409593 PTPRN2Q92932 1015 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 DACT3Q96B18 629 aaPredicted RBP6.24□□□□□ -1.41
PMS1-203ENST00000409593 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
PMS1-203ENST00000409593 AQP7O14520 342 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 MAFKO60675 156 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 SOD2P04179 222 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 GNAT1P11488 350 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 CD300LDQ6UXZ3 194 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 PIP4K2CQ8TBX8 421 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 THAP3Q8WTV1 239 aaPredicted RBP6.23□□□□□ -1.41
PMS1-203ENST00000409593 CPA5Q8WXQ8 436 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 MYOTQ9UBF9 498 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 PTCH2Q9Y6C5 1203 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 FAM47E-STBD1D6RA91 191 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 PLA2G1BP04054 148 aaKnown RBP6.23□□□□□ -1.41
PMS1-203ENST00000409593 C8BP07358 591 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 C6orf222P0C671 652 aaPredicted RBP6.23□□□□□ -1.41
PMS1-203ENST00000409593 CYP2C8P10632 490 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 STAT5AP42229 794 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 GABREP78334 506 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 CCDC144BQ3MJ40 725 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 ZC3H18Q86VM9 953 aaKnown RBP6.23□□□□□ -1.41
PMS1-203ENST00000409593 MIB1Q86YT6 1006 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 FAM26EQ8N5C1 309 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 ZSWIM2Q8NEG5 633 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 IPPKQ9H8X2 491 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 NDOR1Q9UHB4 597 aa6.23□□□□□ -1.41
PMS1-203ENST00000409593 COL6A2P12110 1019 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 GUCY1A3Q02108 690 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 C2orf27AQ580R0 203 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 ZC3H12BQ5HYM0 836 aaKnown RBP6.22□□□□□ -1.41
PMS1-203ENST00000409593 EMC4Q5J8M3 183 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 SPOCD1Q6ZMY3 1216 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 FAM126BQ8IXS8 530 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 LILRB2Q8N423 598 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 ARRDC4Q8NCT1 418 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
PMS1-203ENST00000409593 TCRBV5S2A0A599 114 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 SLC27A2O14975 620 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 SPIRE1Q08AE8 756 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 OTOP3Q7RTS5 596 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 SIAH1Q8IUQ4 282 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 PHOSPHO1Q8TCT1 267 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 FNIP1Q8TF40 1166 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 KISS1RQ969F8 398 aaPredicted RBP6.21□□□□□ -1.42
PMS1-203ENST00000409593 NOX5Q96PH1 765 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 SMOC1Q9H4F8 434 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 SLC6A20Q9NP91 592 aa6.21□□□□□ -1.42
PMS1-203ENST00000409593 TADA3O75528 432 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 BMP7P18075 431 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 PAK1Q13153 545 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 SMAD4Q13485 552 aaKnown RBP6.2□□□□□ -1.42
PMS1-203ENST00000409593 ZBTB8AQ96BR9 441 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 SYT3Q9BQG1 590 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 DTLQ9NZJ0 730 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 PCDHA9Q9Y5H5 950 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 APPP05067 770 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 SRGAP2CP0DJJ0 459 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 STK32CQ86UX6 486 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 RBM12BQ8IXT5 1001 aaKnown RBP6.2□□□□□ -1.42
PMS1-203ENST00000409593 ADGRG2Q8IZP9 1017 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 JMYQ8N9B5 988 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 GORASP1Q9BQQ3 440 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 SLC52A2Q9HAB3 445 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 ASH2LQ9UBL3 628 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 SFMBT1Q9UHJ3 866 aa6.2□□□□□ -1.42
PMS1-203ENST00000409593 NKRFO15226 690 aaKnown RBP eCLIP6.19□□□□□ -1.42
PMS1-203ENST00000409593 CRTAMO95727 393 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 NAT1P18440 290 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 NKX3-2P78367 333 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 HTRA3P83110 453 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 GRIN1Q05586 938 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 CYP4F22Q6NT55 531 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 ZC3H7AQ8IWR0 971 aaKnown RBP6.19□□□□□ -1.42
PMS1-203ENST00000409593 LINC01356Q8N9X3 169 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 TOE1Q96GM8 510 aaKnown RBP6.19□□□□□ -1.42
PMS1-203ENST00000409593 DSEQ9UL01 958 aa6.19□□□□□ -1.42
PMS1-203ENST00000409593 FFAR3O14843 346 aa6.18□□□□□ -1.42
PMS1-203ENST00000409593 LTFP02788 710 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms