RNA–Protein interactions for RNA: ENST00000409189.7

CCL20-202, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCL20, Length 839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-202ENST00000409189 PCDHA4Q9UN74 947 aa8.15□□□□□ -1.1
CCL20-202ENST00000409189 SPTBN5Q9NRC6 3674 aaKnown RBP8.15□□□□□ -1.1
CCL20-202ENST00000409189 RBBP6Q7Z6E9 1792 aaKnown RBP8.15□□□□□ -1.11
CCL20-202ENST00000409189 FARP2O94887 1054 aaPredicted RBP8.14□□□□□ -1.11
CCL20-202ENST00000409189 CAMTA2O94983 1202 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 TBC1D8O95759 1140 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 EN2P19622 333 aaPredicted RBP8.14□□□□□ -1.11
CCL20-202ENST00000409189 CAP2P40123 477 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 GMPSP49915 693 aaPredicted RBP8.14□□□□□ -1.11
CCL20-202ENST00000409189 ST5P78524 1137 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 TAF7Q15545 349 aaPredicted RBP8.14□□□□□ -1.11
CCL20-202ENST00000409189 PCNX4Q63HM2 1172 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 CYFIP1Q7L576 1253 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 TMEM57Q8N5G2 664 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 IL17REQ8NFR9 667 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 GAL3ST3Q96A11 431 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 R3HDMLQ9H3Y0 253 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 FAM8A1Q9UBU6 413 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
CCL20-202ENST00000409189 CACNA1FO60840 1977 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 H0YGN5 161 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 NPHP1O15259 732 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 PTPN11Q06124 597 aaPredicted RBP8.13□□□□□ -1.11
CCL20-202ENST00000409189 TEFQ10587 303 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 HDAC1Q13547 482 aaPredicted RBP8.13□□□□□ -1.11
CCL20-202ENST00000409189 INPP5AQ14642 412 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 LRFN4Q6PJG9 635 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 SPOCD1Q6ZMY3 1216 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 ZNF507Q8TCN5 953 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 STK31Q9BXU1 1019 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 GBA2Q9HCG7 927 aaPredicted RBP8.13□□□□□ -1.11
CCL20-202ENST00000409189 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 PRDM5Q9NQX1 630 aaPredicted RBP8.13□□□□□ -1.11
CCL20-202ENST00000409189 LMCD1Q9NZU5 365 aa8.13□□□□□ -1.11
CCL20-202ENST00000409189 HEG1Q9ULI3 1381 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 RNMTO43148 476 aaKnown RBP8.12□□□□□ -1.11
CCL20-202ENST00000409189 SLITRK5O94991 958 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
CCL20-202ENST00000409189 ZP2Q05996 745 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 CXCL9Q07325 125 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 MESP2Q0VG99 397 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 IKZF1Q13422 519 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 SLBPQ14493 270 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCL20-202ENST00000409189 CCDC30Q5VVM6 783 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 RASAL3Q86YV0 1011 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 FOXQ1Q9C009 403 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 GZF1Q9H116 711 aaPredicted RBP8.12□□□□□ -1.11
CCL20-202ENST00000409189 SLC52A2Q9HAB3 445 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 FBRSQ9HAH7 460 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.12□□□□□ -1.11
CCL20-202ENST00000409189 CTNND2Q9UQB3 1225 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 TNNQ9UQP3 1299 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
CCL20-202ENST00000409189 IBTKQ9P2D0 1353 aaPredicted RBP8.11□□□□□ -1.11
CCL20-202ENST00000409189 DBX1A6NMT0 343 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 ADM5C9JUS6 153 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 USP17L7P0C7H9 530 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
CCL20-202ENST00000409189 SV2BQ7L1I2 683 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 RWDD1Q9H446 243 aaPredicted RBP8.11□□□□□ -1.11
CCL20-202ENST00000409189 SEMA3GQ9NS98 782 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 ZBTB40Q9NUA8 1239 aa8.11□□□□□ -1.11
CCL20-202ENST00000409189 A0A087WZG4 1122 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 ZNF503-AS2A6NEH8 195 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 ELL2O00472 640 aaPredicted RBP8.1□□□□□ -1.11
CCL20-202ENST00000409189 CCT4P50991 539 aaKnown RBP8.1□□□□□ -1.11
CCL20-202ENST00000409189 EIF4A1P60842 406 aaKnown RBP8.1□□□□□ -1.11
CCL20-202ENST00000409189 ATP2B2Q01814 1243 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 ZNF124Q15973 351 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 SND1Q7KZF4 910 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■■■□□ 15.8
CCL20-202ENST00000409189 NBPF5PQ86XG9 351 aaPredicted RBP8.1□□□□□ -1.11
CCL20-202ENST00000409189 NIM1KQ8IY84 436 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 C2orf69Q8N8R5 385 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 BHLHE22Q8NFJ8 381 aaPredicted RBP8.1□□□□□ -1.11
CCL20-202ENST00000409189 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 WNT10AQ9GZT5 417 aa8.1□□□□□ -1.11
CCL20-202ENST00000409189 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.09□□□□□ -1.11
CCL20-202ENST00000409189 PATL2C9JE40 543 aaKnown RBP8.09□□□□□ -1.11
CCL20-202ENST00000409189 A1BGP04217 495 aa8.09□□□□□ -1.11
CCL20-202ENST00000409189 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.11
CCL20-202ENST00000409189 PIP4K2AP48426 406 aaPredicted RBP8.09□□□□□ -1.11
CCL20-202ENST00000409189 KRT26Q7Z3Y9 468 aa8.09□□□□□ -1.11
CCL20-202ENST00000409189 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
CCL20-202ENST00000409189 SNCAIPQ9Y6H5 919 aa8.09□□□□□ -1.11
CCL20-202ENST00000409189 ABCC12Q96J65 1359 aa8.09□□□□□ -1.12
CCL20-202ENST00000409189 PRR33A8MZF0 331 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 PPIP5K2O43314 1243 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 RAD17O75943 681 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 NKG7Q16617 165 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.08□□□□□ -1.12
CCL20-202ENST00000409189 HDXQ7Z353 690 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 SMC5Q8IY18 1101 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 MFSD2AQ8NA29 543 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 PRO3102Q9H379 93 aa8.08□□□□□ -1.12
CCL20-202ENST00000409189 C19orf73Q9NVV2 129 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms