RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 DUSP9Q99956 384 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 BAZ2AQ9UIF9 1905 aaKnown RBP9.18□□□□□ -0.94
SNX13-201ENST00000409076 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
SNX13-201ENST00000409076 ASIC2Q16515 512 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 HP1BP3Q5SSJ5 553 aaPredicted RBP9.17□□□□□ -0.94
SNX13-201ENST00000409076 EHBP1Q8NDI1 1231 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 THRAP3Q9Y2W1 955 aaKnown RBP9.17□□□□□ -0.94
SNX13-201ENST00000409076 SLC9A1P19634 815 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CDK8P49336 464 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 IRAK1P51617 712 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 SLC9C1Q4G0N8 1177 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 VWA3BQ502W6 1294 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CCNI2Q6ZMN8 369 aaPredicted RBP9.17□□□□□ -0.94
SNX13-201ENST00000409076 TRAPPC11Q7Z392 1133 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 ZNF34Q8IZ26 560 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 ANKRD42Q8N9B4 389 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 KIAA0895Q8NCT3 520 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 TRIM51Q9BSJ1 452 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CD248Q9HCU0 757 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 HOMER2Q9NSB8 354 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 AMACRQ9UHK6 382 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 NOVA2Q9UNW9 492 aaKnown RBP9.17□□□□□ -0.94
SNX13-201ENST00000409076 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CDC25CP30307 473 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 ADCY7P51828 1080 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 TRIM14Q14142 442 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 FAM26FQ5R3K3 315 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CCDC174Q6PII3 467 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 TPH2Q8IWU9 490 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CCDC51Q96ER9 411 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 PLAAQ9Y263 795 aa9.17□□□□□ -0.94
SNX13-201ENST00000409076 CAMTA2O94983 1202 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 VIMP08670 466 aaKnown RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 NR2F2P24468 414 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 ALX1Q15699 326 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 NSMFQ6X4W1 530 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 CCDC84Q86UT8 332 aaPredicted RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 MYOCDQ8IZQ8 938 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TRIM58Q8NG06 486 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 RNPC3Q96LT9 517 aaKnown RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TUBGCP6Q96RT7 1819 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 KRIT1O00522 736 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 MAP2K7O14733 419 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 DDAH1O94760 285 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 NTSR2O95665 410 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 GNA11P29992 359 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 HDLBPQ00341 1268 aaKnown RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 SNX1Q13596 522 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 LRRC14Q15048 493 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 RPS6KA1Q15418 735 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 CFAP221Q4G0U5 840 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 INTS5Q6P9B9 1019 aaKnown RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 TPTE2Q6XPS3 522 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TMOD4Q9NZQ9 345 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 STIM2Q9P246 746 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 DDX25Q9UHL0 483 aaKnown RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 BAIAP2L1Q9UHR4 511 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 CAPN11Q9UMQ6 739 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 FOXO6A8MYZ6 492 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 RSPH10B2B2RC85 870 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 OPA1O60313 960 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 PPFIA4O75335 1185 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 CFBP00751 764 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 RSPH10BP0C881 870 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TRIM49P0CI25 452 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TRIM49CP0CI26 452 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 AKR1B1P15121 316 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 NPY5RQ15761 445 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 C2CD6Q53TS8 623 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 TTI2Q6NXR4 508 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 AADACL2Q6P093 401 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 PEX26Q7Z412 305 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 CCNL1Q9UK58 526 aaPredicted RBP9.16□□□□□ -0.94
SNX13-201ENST00000409076 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 PCDHAC2Q9Y5I4 1007 aa9.16□□□□□ -0.94
SNX13-201ENST00000409076 A0A087X0T9 212 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 DAPK3O43293 454 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 ATMINO43313 823 aaPredicted RBP9.15□□□□□ -0.94
SNX13-201ENST00000409076 CALCAP01258 141 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 FAM228BP0C875 321 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 MYBL1P10243 752 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 KCNJ6P48051 423 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 CTTNQ14247 550 aaKnown RBP9.15□□□□□ -0.94
SNX13-201ENST00000409076 FAM133BQ5BKY9 247 aaKnown RBP9.15□□□□□ -0.94
SNX13-201ENST00000409076 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 KCNK9Q9NPC2 374 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 TBK1Q9UHD2 729 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 TCEAL9Q9UHQ7 104 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 SNX12Q9UMY4 172 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 TNS3Q68CZ2 1445 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 PHF20L1A8MW92 1017 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 ZBTB39O15060 712 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 ITGA4P13612 1032 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 EEF1GP26641 437 aaKnown RBP9.15□□□□□ -0.94
SNX13-201ENST00000409076 TRIM28Q13263 835 aaKnown RBP9.15□□□□□ -0.94
SNX13-201ENST00000409076 FAM83BQ5T0W9 1011 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 TADA2BQ86TJ2 420 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms