RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 AKR1B10O60218 316 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 EVI5O60447 810 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CTNND1O60716 968 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 HIP1RO75146 1068 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ATP2C2O75185 946 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SUN1O94901 812 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 RHOBTB3O94955 611 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 FGFR1OPO95684 399 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 OAS1P00973 400 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 AGTP01019 485 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 LMNAP02545 664 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 A1BGP04217 495 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CHGBP05060 677 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 NUDT17P0C025 328 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CCNB1P14635 433 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 GNAZP19086 355 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CALB2P22676 271 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CCNE1P24864 410 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TMOD1P28289 359 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ECHS1P30084 290 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 KRT2P35908 639 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 LONP1P36776 959 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ABL2P42684 1182 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MSH2P43246 934 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MMP13P45452 471 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PDE6CP51160 858 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ALDH5A1P51649 535 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 GUCY2FP51841 1108 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 NLRP5P59047 1200 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 COPS2P61201 443 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 HAND2P61296 217 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MAGOHP61326 146 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ATP2C1P98194 919 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 KLC1Q07866 573 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SFSWAPQ12872 951 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 BNIP1Q12981 228 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MKRN3Q13064 507 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SNX1Q13596 522 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ACVR2BQ13705 512 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 HLTFQ14527 1009 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SETDB1Q15047 1291 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ZRSR2Q15696 482 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 NAB2Q15742 525 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CLUL1Q15846 466 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 UAP1Q16222 522 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 RTN1Q16799 776 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PROSER3Q2NL68 480 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TSNAXIP1Q2TAA8 658 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ASTE1Q2TB18 679 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 KRT71Q3SY84 523 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TMEM67Q5HYA8 995 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SPDYAQ5MJ70 313 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 C10orf76Q5T2E6 689 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MEI1Q5TIA1 1274 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 HHATQ5VTY9 493 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ARL6IP4Q66PJ3 421 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 RNF43Q68DV7 783 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ANO7Q6IWH7 933 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 IRGCQ6NXR0 463 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TTI2Q6NXR4 508 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 FOXR2Q6PJQ5 311 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 BTNL9Q6UXG8 535 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 NFXL1Q6ZNB6 911 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 USP49Q70CQ1 688 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CYB5R4Q7L1T6 521 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ASRGL1Q7L266 308 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ATG9AQ7Z3C6 839 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TRIM74Q86UV6 250 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TRIM73Q86UV7 250 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MICU3Q86XE3 530 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 NCAPG2Q86XI2 1143 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 COL23A1Q86Y22 540 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SMYD4Q8IYR2 804 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 CRACR2BQ8N4Y2 399 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ENDOVQ8N8Q3 282 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 USP38Q8NB14 1042 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 GIMAP8Q8ND71 665 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ACTRT1Q8TDG2 376 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SCFD2Q8WU76 684 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 UBLCP1Q8WVY7 318 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 ATXN2LQ8WWM7 1075 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TAF4BQ92750 862 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 SYN2Q92777 582 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PHKBQ93100 1093 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MKL1Q969V6 931 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MAGOHBQ96A72 148 aaKnown RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PPP1R14BQ96C90 147 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 GRAMD1AQ96CP6 724 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 KLHL29Q96CT2 875 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 LTV1Q96GA3 475 aaPredicted RBP3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 EPSTI1Q96J88 318 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TRIM47Q96LD4 638 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PLEKHG4BQ96PX9 1271 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TMEM237Q96Q45 408 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 KRT12Q99456 494 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 EPAS1Q99814 870 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 MYD88Q99836 296 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TUBGCP2Q9BSJ2 902 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 TMEM109Q9BVC6 243 aa3.38□□□□□ -1.87
RNU6ATAC40P-201ENST00000408580 PHF20Q9BVI0 1012 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms