RNA–Protein interactions for RNA: ENST00000407521.7

PRDM2-205, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-205ENST00000407521 C9orf50Q5SZB4 431 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 ARHGEF16Q5VV41 709 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 AIFM3Q96NN9 605 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
PRDM2-205ENST00000407521 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.15□□□□□ -0.3
PRDM2-205ENST00000407521 A6NJR5 290 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 TIMP1P01033 207 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 NR3C2P08235 984 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 TXNP10599 105 aaKnown RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 KIF5BP33176 963 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 CPT1AP50416 773 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 RCAN1P53805 252 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 EPHB4P54760 987 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 PSMC6P62333 389 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 FUT2Q10981 343 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 SHHQ15465 462 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 STXBP2Q15833 593 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 GPR153Q6NV75 609 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 SMARCC2Q8TAQ2 1214 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 INTS4Q96HW7 963 aaKnown RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 RBM28Q9NW13 759 aaKnown RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 V9GY48 417 aaPredicted RBP13.14□□□□□ -0.31
PRDM2-205ENST00000407521 NID2Q14112 1375 aa13.14□□□□□ -0.31
PRDM2-205ENST00000407521 FRMPD4Q14CM0 1322 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 CCDC196A0A1B0GTZ2 297 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 TLR3O15455 904 aaKnown RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 RGS20O76081 388 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 IFNAR1P17181 557 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 SSRP1Q08945 709 aaKnown RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 TRAF1Q13077 416 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 PGM5Q15124 567 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 SEPT14Q6ZU15 432 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 IL31RAQ8NI17 732 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 LZTS2Q9BRK4 669 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
PRDM2-205ENST00000407521 SEZ6LQ9BYH1 1024 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
PRDM2-205ENST00000407521 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-205ENST00000407521 B4GALT4O60513 344 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
PRDM2-205ENST00000407521 MMP3P08254 477 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 MYL3P08590 195 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 GNAQP50148 359 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 GUCY1B3Q02153 619 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 FPGSQ05932 587 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 PKP1Q13835 747 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 LY6KQ17RY6 165 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
PRDM2-205ENST00000407521 DDX41Q9UJV9 622 aaKnown RBP13.12□□□□□ -0.31
PRDM2-205ENST00000407521 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
PRDM2-205ENST00000407521 LAMA2P24043 3122 aaKnown RBP13.11□□□□□ -0.31
PRDM2-205ENST00000407521 CDKL5O76039 1030 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 GH1P01241 217 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 VSIG10LQ86VR7 867 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 EMID1Q96A84 441 aaPredicted RBP13.11□□□□□ -0.31
PRDM2-205ENST00000407521 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
PRDM2-205ENST00000407521 PPP1R12CQ9BZL4 782 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 UMODL1Q5DID0 1318 aa13.11□□□□□ -0.31
PRDM2-205ENST00000407521 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 MEIS2O14770 477 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 KPNA6O60684 536 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 MYCLP12524 364 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 DDIT3P35638 169 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 AKAP17AQ02040 695 aaKnown RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 PKN1Q16512 942 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 BRDTQ58F21 947 aaPredicted RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 LARP1BQ659C4 914 aaKnown RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 ALG1Q9BT22 464 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 NOC4LQ9BVI4 516 aaKnown RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
PRDM2-205ENST00000407521 MRVI1Q9Y6F6 885 aa13.1□□□□□ -0.31
PRDM2-205ENST00000407521 PIK3CDO00329 1044 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 CSF2RAP15509 400 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 SYT1P21579 422 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 CCND2P30279 289 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 CYP2C18P33260 490 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 MRPS9P82933 396 aaKnown RBP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 PPIGQ13427 754 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms