RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
APOBEC3B-204ENST00000407298 GRXCR2A6NFK2 248 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 RSPH10B2B2RC85 870 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 HAS3O00219 553 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 NCK2O43639 380 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 RSPH10BP0C881 870 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 HDAC1Q13547 482 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 TRIM71Q2Q1W2 868 aaKnown RBP14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 KCNH6Q9H252 994 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 COL4A4P53420 1690 aaPredicted RBP14.32□□□□□ -0.12
APOBEC3B-204ENST00000407298 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZNF213O14771 459 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZNF286BP0CG31 522 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 TGFB3P10600 412 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 HOXD8P13378 290 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 EIF2AK2P19525 551 aaKnown RBP14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 THPOP40225 353 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 PDE1AP54750 535 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 HTRA4P83105 476 aaPredicted RBP14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 TRAF1Q13077 416 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 MYOCDQ8IZQ8 938 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 ANKS1AQ92625 1134 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 UIMC1Q96RL1 719 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 UPF3BQ9BZI7 483 aaKnown RBP14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 COL20A1Q9P218 1284 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 CCDC171Q6TFL3 1326 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 PTPRSQ13332 1948 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
APOBEC3B-204ENST00000407298 SIP14410 1827 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 CAND2O75155 1236 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 CFBP00751 764 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 TCTN1Q2MV58 587 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 QRICH1Q2TAL8 776 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 EPC2Q52LR7 807 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 CELF3Q5SZQ8 465 aaKnown RBP14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 TRAF7Q6Q0C0 670 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 SERINC5Q86VE9 423 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 BANK1Q8NDB2 785 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 DBF4BQ8NFT6 615 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 NEK9Q8TD19 979 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 SP7Q8TDD2 431 aaPredicted RBP14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 SEPT8Q92599 483 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 YME1L1Q96TA2 773 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZKSCAN3Q9BRR0 538 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 C17orf80Q9BSJ5 609 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 PRKAG3Q9UGI9 489 aa14.3□□□□□ -0.12
APOBEC3B-204ENST00000407298 C17orf102A2RUQ5 167 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 TRIM6-TRIM34B2RNG4 842 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 H3BNC9 293 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 DCXO43602 365 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 GNAT1P11488 350 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 IL9P15248 144 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 HSD17B4P51659 736 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZNF200P98182 395 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 GPM6BQ13491 265 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 MBTPS1Q14703 1052 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 PLEKHG4Q58EX7 1191 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 TBC1D10CQ8IV04 446 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 ATP6V0A1Q93050 837 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 CPVLQ9H3G5 476 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 MLXIPQ9HAP2 919 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
APOBEC3B-204ENST00000407298 KDM4AO75164 1064 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 GGPS1O95749 300 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 MYCLP12524 364 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 NMIQ13287 307 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 STOX1Q6ZVD7 989 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 VSIG10LQ86VR7 867 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 APBB2Q92870 758 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 JMJD4Q9H9V9 463 aa14.28□□□□□ -0.12
APOBEC3B-204ENST00000407298 NEDD4P46934 1319 aa14.27□□□□□ -0.12
APOBEC3B-204ENST00000407298 POTEB3A0JP26 581 aa14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 H3BQ06 376 aaPredicted RBP14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 H3BRB1 525 aa14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 CCND2P30279 289 aa14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 GHRHRQ02643 423 aa14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 AAMPQ13685 434 aa14.27□□□□□ -0.13
APOBEC3B-204ENST00000407298 HSDL1Q3SXM5 330 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms