RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 NFIAQ12857 509 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 KLHDC7AQ5VTJ3 777 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 PPP1R18Q6NYC8 613 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 C2CD5Q86YS7 1000 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 NGLY1Q96IV0 654 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 TLR10Q9BXR5 811 aa10.94□□□□□ -0.66
MSH2-202ENST00000406134 KRT86O43790 486 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 ONECUT3O60422 494 aaPredicted RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 PPP1R2P41236 205 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 CASP5P51878 434 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 IRX5P78411 483 aaPredicted RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 GFPT1Q06210 699 aaPredicted RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 PICALMQ13492 652 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 TAF3Q5VWG9 929 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 APOBEC3HQ6NTF7 200 aaKnown RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 CCNI2Q6ZMN8 369 aaPredicted RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 FAM114A1Q8IWE2 563 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 SNX29Q8TEQ0 813 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 LENG9Q96B70 501 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 ZNF287Q9HBT7 754 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 DMGDHQ9UI17 866 aaKnown RBP10.93□□□□□ -0.66
MSH2-202ENST00000406134 WDR81Q562E7 1941 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 NCK2O43639 380 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 PLCG2P16885 1265 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 POLD1P28340 1107 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 TMC4Q7Z404 712 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 MMGT1Q8N4V1 131 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 SCFD1Q8WVM8 642 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 CALML4Q96GE6 196 aa10.93□□□□□ -0.66
MSH2-202ENST00000406134 PRLRP16471 622 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 ADRA2BP18089 450 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 SLC1A4P43007 532 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 SLC12A3P55017 1021 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 GTF2IP78347 998 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 KIAA1328Q86T90 577 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 TXLNBQ8N3L3 684 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 KANSL2Q9H9L4 492 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 E9PMD0 336 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 OPLAHO14841 1288 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 TTLL1O95922 423 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 IDEP14735 1019 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 AMPD3Q01432 767 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 ITIH3Q06033 890 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 CDC42EP5Q6NZY7 148 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 KCTD1Q719H9 257 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 SH3BP5LQ7L8J4 393 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 ETNPPLQ8TBG4 499 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 FAM71BQ8TC56 605 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 UIMC1Q96RL1 719 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 CRAMP1Q96RY5 1269 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 OSBPL9Q96SU4 736 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 HINFPQ9BQA5 517 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 LRRC1Q9BTT6 524 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 GANQ9H2C0 597 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 KCNQ5Q9NR82 932 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 DDX25Q9UHL0 483 aaKnown RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 LOXHD1Q8IVV2 1947 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 CCDC66A2RUB6 948 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 MEIS2O14770 477 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 MED24O75448 989 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 TAL1P17542 331 aaPredicted RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 MRPS25P82663 173 aaKnown RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 TRIM59Q8IWR1 403 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 RBM17Q96I25 401 aaKnown RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 GDAP1L1Q96MZ0 367 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 SELENOOQ9BVL4 669 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 IFIH1Q9BYX4 1025 aaKnown RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 USP21Q9UK80 565 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 NENFQ9UMX5 172 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 RGPD3A6NKT7 1758 aaPredicted RBP10.92□□□□□ -0.66
MSH2-202ENST00000406134 RGPD4Q7Z3J3 1758 aa10.92□□□□□ -0.66
MSH2-202ENST00000406134 CYP3A7-CYP3A51PA0A087WV96 503 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 CYP3A7P24462 503 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 JAG1P78504 1218 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 AJAP1Q9UKB5 411 aaPredicted RBP10.91□□□□□ -0.66
MSH2-202ENST00000406134 JRKLQ9Y4A0 524 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 POTEB3A0JP26 581 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 POTECB2RU33 542 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 ZBTB5O15062 677 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 ERLIN1O75477 346 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 BBOX1O75936 387 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 CYP11B2P19099 503 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 STAT3P40763 770 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 TNNI2P48788 182 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 PSMD2Q13200 908 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 ZSCAN26Q16670 478 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 POTEBQ6S5H4 581 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 RRAGAQ7L523 313 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 PROM2Q8N271 834 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 TBC1D22AQ8WUA7 517 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L15C9J2P7 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L13C9JLJ4 530 aa10.91□□□□□ -0.66
MSH2-202ENST00000406134 USP17L11C9JVI0 530 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms