RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 IKQ13123 557 aaPredicted RBP7.28□□□□□ -1.24
RPA3-204ENST00000406109 COL19A1Q14993 1142 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 PWP2Q15269 919 aaKnown RBP7.28□□□□□ -1.24
RPA3-204ENST00000406109 PTGISQ16647 500 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 FAM47CQ5HY64 1035 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 VPS53Q5VIR6 699 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 PTCRAQ6ISU1 281 aaPredicted RBP7.28□□□□□ -1.24
RPA3-204ENST00000406109 CCDC62Q6P9F0 684 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 BTNL9Q6UXG8 535 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 SESTD1Q86VW0 696 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 CAGE1Q8TC20 777 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 AFAP1L1Q8TED9 768 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 WNT8BQ93098 351 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 TGS1Q96RS0 853 aaKnown RBP7.28□□□□□ -1.24
RPA3-204ENST00000406109 ZNF287Q9HBT7 754 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 MYH7BA7E2Y1 1941 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 EPG5Q9HCE0 2579 aa7.28□□□□□ -1.24
RPA3-204ENST00000406109 KIAA1217Q5T5P2 1943 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 NKRFO15226 690 aaKnown RBP eCLIP7.27□□□□□ -1.25
RPA3-204ENST00000406109 KPNA6O60684 536 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 CKBP12277 381 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 ALADP13716 330 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 SELPP16109 830 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 KCNJ6P48051 423 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 MFAP1P55081 439 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 RPS6P62753 249 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 ZP2Q05996 745 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 PDE4BQ07343 736 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 PPARAQ07869 468 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 HIC1Q14526 733 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 PPP2R5BQ15173 497 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 TRIM71Q2Q1W2 868 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 CNKSR3Q6P9H4 555 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 HFE2Q6ZVN8 426 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 SCFD2Q8WU76 684 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 AFG1LQ8WV93 481 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 SNX27Q96L92 541 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 PHOX2BQ99453 314 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 C17orf80Q9BSJ5 609 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 NAPBQ9H115 298 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 GPHNQ9NQX3 736 aaPredicted RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 ADD3Q9UEY8 706 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 ISY1Q9ULR0 285 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 STX8Q9UNK0 236 aa7.27□□□□□ -1.25
RPA3-204ENST00000406109 TPRP12270 2363 aaKnown RBP7.27□□□□□ -1.25
RPA3-204ENST00000406109 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 PTPDC1A2A3K4 754 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 H3BQ06 376 aaPredicted RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 DCXO43602 365 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 FGAP02671 866 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 SLC3A2P08195 630 aaKnown RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 MMP3P08254 477 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 FGRP09769 529 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 HSPD1P10809 573 aaKnown RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 CHMLP26374 656 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 CALML3P27482 149 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 SSTR3P32745 418 aaPredicted RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 LTBRP36941 435 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 HTRA4P83105 476 aaPredicted RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 CTDSPL2Q05D32 466 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 ARHGAP1Q07960 439 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 LY6KQ17RY6 165 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 SYDE2Q5VT97 1194 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.26□□□□□ -1.25
RPA3-204ENST00000406109 LRRC8DQ7L1W4 858 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 ZNF589Q86UQ0 364 aaPredicted RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 EFCAB3Q8N7B9 438 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 DNERQ8NFT8 737 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 DCAF4Q8WV16 495 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 RUFY2Q8WXA3 655 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 MRPL38Q96DV4 380 aaKnown RBP7.26□□□□□ -1.25
RPA3-204ENST00000406109 UIMC1Q96RL1 719 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 ZBED2Q9BTP6 218 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 GTF2IRD1Q9UHL9 959 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 CCDC171Q6TFL3 1326 aa7.26□□□□□ -1.25
RPA3-204ENST00000406109 LGR5O75473 907 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 CHMP4BP1P59074 171 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 ZNF200P98182 395 aaPredicted RBP7.25□□□□□ -1.25
RPA3-204ENST00000406109 PDE4DQ08499 809 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 ALX1Q15699 326 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 EPC2Q52LR7 807 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 BRDTQ58F21 947 aaPredicted RBP7.25□□□□□ -1.25
RPA3-204ENST00000406109 ZNF618Q5T7W0 954 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 FAM117BQ6P1L5 589 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 RNF207Q6ZRF8 634 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 FBXO22Q8NEZ5 403 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 TBC1D5Q92609 795 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 OSBPL7Q9BZF2 842 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 KCNH6Q9H252 994 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 HDAC6Q9UBN7 1215 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 MTMR7Q9Y216 660 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 INSL6Q9Y581 213 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 NLRC5Q86WI3 1866 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 NCOR2Q9Y618 2525 aa7.25□□□□□ -1.25
RPA3-204ENST00000406109 FRMPD2Q68DX3 1309 aaPredicted RBP7.25□□□□□ -1.25
RPA3-204ENST00000406109 RAD50Q92878 1312 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms