RNA–Protein interactions for RNA: ENST00000405801.2

FSCN1-202, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 4

Gene FSCN1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-202ENST00000405801 CCND2P30279 289 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 ADD1P35611 737 aaKnown RBP21.54■■□□□ 1.04
FSCN1-202ENST00000405801 METAP2P50579 478 aaKnown RBP eCLIP21.54■■□□□ 1.041e-6■■□□□ 14.5
FSCN1-202ENST00000405801 CCL23P55773 120 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 LY6KQ17RY6 165 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 KCNV1Q6PIU1 500 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 TEX2Q8IWB9 1127 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 MYLIPQ8WY64 445 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 V9GY48 417 aaPredicted RBP21.54■■□□□ 1.04
FSCN1-202ENST00000405801 CHD9Q3L8U1 2897 aa21.54■■□□□ 1.04
FSCN1-202ENST00000405801 STAM2O75886 525 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 GH1P01241 217 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 TGFB3P10600 412 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 ARHGAP1Q07960 439 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 NBPF20Q3BBV1 942 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 SMARCC2Q8TAQ2 1214 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 EMID1Q96A84 441 aaPredicted RBP21.53■■□□□ 1.04
FSCN1-202ENST00000405801 TANC1Q9C0D5 1861 aa21.53■■□□□ 1.04
FSCN1-202ENST00000405801 SUPT20HL2P0C7V6 817 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 CYP2C9P11712 490 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 MRPS9P82933 396 aaKnown RBP21.52■■□□□ 1.04
FSCN1-202ENST00000405801 FAM47CQ5HY64 1035 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 WWC2Q6AWC2 1192 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 XRRA1Q6P2D8 792 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 HEATR3Q7Z4Q2 680 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 PPP1R13LQ8WUF5 828 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 HERVK_113Q902F9 699 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 MRVI1Q9Y6F6 885 aa21.52■■□□□ 1.04
FSCN1-202ENST00000405801 GBF1Q92538 1859 aa21.52■■□□□ 1.03
FSCN1-202ENST00000405801 GRXCR1A8MXD5 290 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 hCG_1984214I3L0E3 225 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 PDIA3P30101 505 aaKnown RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 ANAPC15P60006 121 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 TOB2Q14106 344 aaPredicted RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 TYW1BQ6NUM6 668 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 PPP1R18Q6NYC8 613 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 NFRKBQ6P4R8 1299 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 ZNF713Q8N859 430 aaPredicted RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 GPKOWQ92917 476 aaPredicted RBP eCLIP21.51■■□□□ 1.032e-6■■■■□ 20.4
FSCN1-202ENST00000405801 TIFAQ96CG3 184 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 SCLYQ96I15 445 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 INPP4AQ96PE3 977 aaPredicted RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 PBX4Q9BYU1 374 aa21.51■■□□□ 1.03
FSCN1-202ENST00000405801 UPF3BQ9BZI7 483 aaKnown RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 CXXC1Q9P0U4 656 aaPredicted RBP21.51■■□□□ 1.03
FSCN1-202ENST00000405801 SCN5AQ14524 2016 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 DLL1O00548 723 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 FGBP02675 491 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 MMP3P08254 477 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 ICAM3P32942 547 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 PBX2P40425 430 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 LAMC2Q13753 1193 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 NTRK3Q16288 839 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 PCNX4Q63HM2 1172 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 MAFAQ8NHW3 353 aaPredicted RBP21.5■■□□□ 1.03
FSCN1-202ENST00000405801 VWCEQ96DN2 955 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 IL17RAQ96F46 866 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 MTIF3Q9H2K0 278 aaKnown RBP21.5■■□□□ 1.03
FSCN1-202ENST00000405801 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
FSCN1-202ENST00000405801 STXBP3O00186 592 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 FOSL2P15408 326 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 PTPN11Q06124 597 aaPredicted RBP21.49■■□□□ 1.03
FSCN1-202ENST00000405801 GRIN2CQ14957 1233 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 OTOP2Q7RTS6 562 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 ZNF274Q96GC6 653 aaPredicted RBP21.49■■□□□ 1.03
FSCN1-202ENST00000405801 ZNF576Q9H609 170 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 RIC8AQ9NPQ8 531 aa21.49■■□□□ 1.03
FSCN1-202ENST00000405801 PRPF3O43395 683 aaKnown RBP21.48■■□□□ 1.03
FSCN1-202ENST00000405801 SEC24BO95487 1268 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 NAPAP54920 295 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 SP2Q02086 613 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 PFKFB3Q16875 520 aaPredicted RBP21.48■■□□□ 1.03
FSCN1-202ENST00000405801 GNPTABQ3T906 1256 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 CELF3Q5SZQ8 465 aaKnown RBP21.48■■□□□ 1.03
FSCN1-202ENST00000405801 MYSM1Q5VVJ2 828 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.48■■□□□ 1.034e-6■■■■■ 40.8
FSCN1-202ENST00000405801 RPUSD2Q8IZ73 545 aaKnown RBP21.48■■□□□ 1.03
FSCN1-202ENST00000405801 ZFP91Q96JP5 570 aaPredicted RBP21.48■■□□□ 1.03
FSCN1-202ENST00000405801 PDRG1Q9NUG6 133 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 PRUNE2Q8WUY3 3088 aa21.48■■□□□ 1.03
FSCN1-202ENST00000405801 SPATA31C2B4DYI2 1134 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 HOXD8P13378 290 aaPredicted RBP21.47■■□□□ 1.03
FSCN1-202ENST00000405801 IFNAR1P17181 557 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 UBE2SQ16763 222 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 DHX37Q8IY37 1157 aaKnown RBP21.47■■□□□ 1.03
FSCN1-202ENST00000405801 PPTC7Q8NI37 304 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 GLT8D2Q9H1C3 349 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 PCDHA6Q9UN73 950 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 PCDHA8Q9Y5H6 950 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 MYH7BA7E2Y1 1941 aa21.47■■□□□ 1.03
FSCN1-202ENST00000405801 SPDYE3A6NKU9 549 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 SCG2P13521 617 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 UBA1P22314 1058 aaKnown RBP21.46■■□□□ 1.03
FSCN1-202ENST00000405801 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 SEMA3FQ13275 785 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 PKN1Q16512 942 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 DGKDQ16760 1214 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 KAT2BQ92831 832 aa21.46■■□□□ 1.03
FSCN1-202ENST00000405801 RTEL1Q9NZ71 1219 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms