RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 LRCH3Q96II8 777 aa20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 RNF26Q9BY78 433 aaPredicted RBP20.53■□□□□ 0.88
THUMPD2-202ENST00000403537 MYCLP12524 364 aaPredicted RBP20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 SCG2P13521 617 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 ITGB8P26012 769 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 LAMC2Q13753 1193 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 PFKFB3Q16875 520 aaPredicted RBP20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 XRRA1Q6P2D8 792 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 NFRKBQ6P4R8 1299 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 TMX3Q96JJ7 454 aa20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 DDX41Q9UJV9 622 aaKnown RBP20.52■□□□□ 0.88
THUMPD2-202ENST00000403537 GRIN2DO15399 1336 aa20.52■□□□□ 0.87
THUMPD2-202ENST00000403537 PIK3CDO00329 1044 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 ADAMTS3O15072 1205 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 ARIH2O95376 493 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 PTGS1P23219 599 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 ARHGAP1Q07960 439 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 SSRP1Q08945 709 aaKnown RBP20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 PGM5Q15124 567 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 SHHQ15465 462 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 LY6KQ17RY6 165 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 FCHSD1Q86WN1 690 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 COPS5Q92905 334 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 HIPK3Q9H422 1215 aa20.51■□□□□ 0.87
THUMPD2-202ENST00000403537 FDPSP14324 419 aaKnown RBP20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 NAPAP54920 295 aa20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 PSMC6P62333 389 aa20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 DGKDQ16760 1214 aa20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 FAM109BQ6ICB4 259 aaPredicted RBP20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 AFG1LQ8WV93 481 aa20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 RNPC3Q96LT9 517 aaKnown RBP20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 ZSCAN31Q96LW9 406 aaPredicted RBP20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 FRMPD4Q14CM0 1322 aa20.5■□□□□ 0.87
THUMPD2-202ENST00000403537 MMP3P08254 477 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 AKAP17AQ02040 695 aaKnown RBP20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 UBE2SQ16763 222 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 PSRC1Q6PGN9 363 aaPredicted RBP20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 CPLX2Q6PUV4 134 aaKnown RBP20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 DHX37Q8IY37 1157 aaKnown RBP20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 TRIM22Q8IYM9 498 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 PPTC7Q8NI37 304 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 KATNAL1Q9BW62 490 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 SH2B1Q9NRF2 756 aaPredicted RBP20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 GJB4Q9NTQ9 266 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 VPS54Q9P1Q0 977 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 STK36Q9NRP7 1315 aa20.49■□□□□ 0.87
THUMPD2-202ENST00000403537 B4GALT4O60513 344 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 CDKL5O76039 1030 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 SMAD3P84022 425 aaKnown RBP20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 NBPF20Q3BBV1 942 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 C9orf50Q5SZB4 431 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 PPP1R12CQ9BZL4 782 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 TRPV6Q9H1D0 765 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 MTIF3Q9H2K0 278 aaKnown RBP20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 PSTPIP2Q9H939 334 aa20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 ORC3Q9UBD5 711 aaPredicted RBP20.48■□□□□ 0.87
THUMPD2-202ENST00000403537 hCG_1984214I3L0E3 225 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 MEIS2O14770 477 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 DEXIO95424 95 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 FOSBP53539 338 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 FAM47CQ5HY64 1035 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 DEFB123Q8N688 67 aa20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 ZNF713Q8N859 430 aaPredicted RBP20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 NOC4LQ9BVI4 516 aaKnown RBP20.47■□□□□ 0.87
THUMPD2-202ENST00000403537 PPFIA4O75335 1185 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 CYP2C18P33260 490 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 CELF3Q5SZQ8 465 aaKnown RBP20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 PCNX4Q63HM2 1172 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 PPP1R18Q6NYC8 613 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 SESTD1Q86VW0 696 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 INPP4AQ96PE3 977 aaPredicted RBP20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 EHMT1Q9H9B1 1298 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 NOD1Q9Y239 953 aa20.46■□□□□ 0.87
THUMPD2-202ENST00000403537 RGS20O76081 388 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 GGPS1O95749 300 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 CSF2RAP15509 400 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 ICAM3P32942 547 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 MCM2P49736 904 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 EPHB4P54760 987 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 NEDD9Q14511 834 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 MYSM1Q5VVJ2 828 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 NLRX1Q86UT6 975 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 CCDC155Q8N6L0 562 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 IL31RAQ8NI17 732 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 CDHR1Q96JP9 859 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 MLXIPQ9HAP2 919 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 TMEM260Q9NX78 707 aa20.45■□□□□ 0.86
THUMPD2-202ENST00000403537 SMCO2A6NFE2 343 aa20.44■□□□□ 0.86
THUMPD2-202ENST00000403537 SPDYE3A6NKU9 549 aa20.44■□□□□ 0.86
THUMPD2-202ENST00000403537 FIBPO43427 364 aa20.44■□□□□ 0.86
THUMPD2-202ENST00000403537 PFKMP08237 780 aa20.44■□□□□ 0.86
THUMPD2-202ENST00000403537 HOXD8P13378 290 aaPredicted RBP20.44■□□□□ 0.86
THUMPD2-202ENST00000403537 ADCY7P51828 1080 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms