RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FAM47CQ5HY64 1035 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 ARHGAP36Q6ZRI8 547 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 FKBP9P1Q75LS8 142 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 C16orf59Q7L2K0 433 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 DTX1Q86Y01 620 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 STK11IPQ8N1F8 1099 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 C2orf69Q8N8R5 385 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 SMC1BQ8NDV3 1235 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 MTMR8Q96EF0 704 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 TTC1Q99614 292 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 CD244Q9BZW8 370 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 VTA1Q9NP79 307 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 CABP5Q9NP86 173 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 SLC5A4Q9NY91 659 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 THRAP3Q9Y2W1 955 aaKnown RBP5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 TAF6LQ9Y6J9 622 aa5.36□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQ45 241 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 A0A1W2PQY0 241 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 H7BY64 318 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 ZNF561-AS1K7EIQ3 104 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 GAS7O60861 476 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 PARNO95453 639 aaKnown RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 NPTXRO95502 500 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 LTFP02788 710 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 PRNPP04156 253 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 KIR2DL1P43626 348 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 KIR2DL2P43627 348 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 CD97P48960 835 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 GTF2A2P52657 109 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 SART3Q15020 963 aaKnown RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 CRY1Q16526 586 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 ODR4Q5SWX8 454 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 XP32Q5T750 250 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 CPZQ66K79 652 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 CREB3L3Q68CJ9 461 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 INTS5Q6P9B9 1019 aaKnown RBP5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 VSIG10LQ86VR7 867 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 LZTR1Q8N653 840 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 SH3RF2Q8TEC5 729 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 JDP2Q8WYK2 163 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 MS4A5Q9H3V2 200 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 IFT22Q9H7X7 185 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 SP110Q9HB58 689 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 B4GALT6Q9UBX8 382 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 ZKSCAN5Q9Y2L8 839 aa5.35□□□□□ -1.55
HMGB1P17-201ENST00000403495 PHLDB1Q86UU1 1377 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 LCHNA4D1U4 455 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 DVL2O14641 736 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 WNT9AO14904 365 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 IGHA1P01876 353 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 CPEP16870 476 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 YBX3P16989 372 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 FUT4P22083 530 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 ITKQ08881 620 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 PLCL1Q15111 1095 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 OTOP3Q7RTS5 596 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 HDGFL2Q7Z4V5 671 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 TP53INP2Q8IXH6 220 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 ANKS4BQ8N8V4 417 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 ASPSCR1Q9BZE9 553 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 MBNL3Q9NUK0 354 aaKnown RBP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 OXSMQ9NWU1 459 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 GPR160Q9UJ42 338 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 ANGEL1Q9UNK9 670 aaKnown RBP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 COA3Q9Y2R0 106 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 X6R8D5 127 aa5.34□□□□□ -1.55
HMGB1P17-201ENST00000403495 MAN2B1O00754 1011 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 SCDO00767 359 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC27A2O14975 620 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 NRDCO43847 1150 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 PRKD3O94806 890 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 RNASE1P07998 156 aaKnown RBP5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC9A1P19634 815 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 EXOSC10Q01780 885 aaKnown RBP5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 ATP13A4Q4VNC1 1196 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 BICRALQ6AI39 1079 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 GALNT18Q6P9A2 607 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 SPATS2Q86XZ4 545 aaKnown RBP5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 Q8N1Y9 231 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 CNTD1Q8N815 330 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 PDZD8Q8NEN9 1154 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 ASIC4Q96FT7 647 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 CEP89Q96ST8 783 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 ORAI3Q9BRQ5 295 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 EPB41L1Q9H4G0 881 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 EMC7Q9NPA0 242 aa5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 TYW1Q9NV66 732 aaKnown RBP5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P17-201ENST00000403495 A0A1W2PQJ5 194 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 SLC12A8A0AV02 714 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 KIAA1324LA8MWY0 1029 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 ALG1L2C9J202 215 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 GSTA4O15217 222 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 TGM5O43548 720 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 BRINP1O60477 761 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 DGKIO75912 1065 aa5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 ZBTB48P10074 688 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P17-201ENST00000403495 KPNA1P52294 538 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms