RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 UPF3AQ9H1J1 476 aaKnown RBP19.59■□□□□ 0.73
PTCHD3P3-201ENST00000403073 BCAS3Q9H6U6 928 aa19.59■□□□□ 0.73
PTCHD3P3-201ENST00000403073 KIF3AQ9Y496 699 aa19.59■□□□□ 0.73
PTCHD3P3-201ENST00000403073 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FAM86B1E9PN63 330 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NKRFO15226 690 aaKnown RBP eCLIP19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CTAGE5O15320 804 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FAM86B2P0C5J1 330 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CAPN2P17655 700 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MTMR1Q13613 665 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SAFBQ15424 915 aaKnown RBP eCLIP19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 INF2Q27J81 1249 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CEP55Q53EZ4 464 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 RNF180Q86T96 592 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ANKLE1Q8NAG6 615 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KLHDC9Q8NEP7 349 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 GPRASP2Q96D09 838 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SPC25Q9HBM1 224 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PKD2L1Q9P0L9 805 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 LRRC37A2A6NM11 1700 aa19.58■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MEIS1O00470 390 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ATP9AO75110 1047 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FARP2O94887 1054 aaPredicted RBP19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 GH1P01241 217 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ARP10275 920 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 TGFB3P10600 412 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 UBA1P22314 1058 aaKnown RBP19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 USP11P51784 963 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ARHGAP1Q07960 439 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 GNASQ5JWF2 1037 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 DHX37Q8IY37 1157 aaKnown RBP19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 INTS4Q96HW7 963 aaKnown RBP19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PAWRQ96IZ0 340 aaKnown RBP19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KCNH7Q9NS40 1196 aa19.57■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MCM3APO60318 1980 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 IGLV3-22A0A075B6J6 115 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 DNM1LO00429 736 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 GGPS1O95749 300 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CIITAP33076 1130 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NKX3-2P78367 333 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KCNA10Q16322 511 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FSCN1Q16658 493 aaKnown RBP19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CELF3Q5SZQ8 465 aaKnown RBP19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 LARP1BQ659C4 914 aaKnown RBP19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CCSAPQ6IQ19 270 aaPredicted RBP19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PLA2G4DQ86XP0 818 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 UIMC1Q96RL1 719 aa19.56■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KBTBD13C9JR72 458 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MAFGO15525 162 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 LAMC2Q13753 1193 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PRR16Q569H4 304 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MYSM1Q5VVJ2 828 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 UBE2Q1Q7Z7E8 422 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 AFG1LQ8WV93 481 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FERMT2Q96AC1 680 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CDHR1Q96JP9 859 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MLXIPQ9HAP2 919 aa19.55■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KIF28PB7ZC32 967 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 H3BQV1 296 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 TDP2O95551 362 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 KCNA2P16389 499 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CST5P28325 142 aaPredicted RBP19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NEDD9Q14511 834 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 LETM2Q2VYF4 491 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CYFIP1Q7L576 1253 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NIPA1Q7RTP0 329 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NECAB2Q7Z6G3 386 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 NEK8Q86SG6 692 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SPRYD3Q8NCJ5 442 aa19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 TSEN34Q9BSV6 310 aaKnown RBP19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SENP6Q9GZR1 1112 aaPredicted RBP19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 FOXP1Q9H334 677 aaPredicted RBP19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 AGO4Q9HCK5 861 aaKnown RBP19.54■□□□□ 0.72
PTCHD3P3-201ENST00000403073 A6NJR5 290 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ASGR1P07306 291 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 COL6A1P12109 1028 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CPT1AP50416 773 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ACLYP53396 1101 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PCSK9Q8NBP7 692 aaKnown RBP19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 EMID1Q96A84 441 aaPredicted RBP19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 LENG9Q96B70 501 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SPATA33Q96N06 139 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 SENP7Q9BQF6 1050 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 C11orf49Q9H6J7 331 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 PHF24Q9UPV7 400 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CYP3A7-CYP3A51PA0A087WV96 503 aa19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MYL3P08590 195 aa19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 CYP3A7P24462 503 aa19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 ITGB3BPQ13352 177 aaPredicted RBP19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 HSDL1Q3SXM5 330 aa19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
PTCHD3P3-201ENST00000403073 MOXD2PA6NHM9 499 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ZEB2O60315 1214 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 CCNT1O60563 726 aaKnown RBP19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 MMP3P08254 477 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ATP2B1P20020 1258 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms