RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 FKBP3Q00688 224 aaKnown RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 SLC7A5Q01650 507 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 PPARDQ03181 441 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 NFIAQ12857 509 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 ADAM9Q13443 819 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 SLC9C1Q4G0N8 1177 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 KCNK18Q7Z418 384 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 CENPHQ9H3R5 247 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 RABEP2Q9H5N1 569 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 CWC15Q9P013 229 aaKnown RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 PCDHA13Q9Y5I0 950 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 COL4A1P02462 1669 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 ZBTB5O15062 677 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 CETN3O15182 167 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 GFPT1Q06210 699 aaPredicted RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 ZNF543Q08ER8 600 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 PLS1Q14651 629 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 GPATCH4Q5T3I0 446 aaKnown RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 WDR59Q6PJI9 974 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC170Q8IYT3 715 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 TRIM58Q8NG06 486 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 LRRC15Q8TF66 581 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 IFT81Q8WYA0 676 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 TAF4BQ92750 862 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 TSGA10Q9BZW7 698 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 COA1Q9GZY4 146 aa8.5□□□□□ -1.05
HDAC9-201ENST00000401921 REXO2Q9Y3B8 237 aaKnown RBP8.5□□□□□ -1.05
HDAC9-201ENST00000401921 TBCAO75347 108 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CFBP00751 764 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 PLA2G4BP0C869 781 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 HOXA13P31271 388 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 VAV2P52735 878 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 UBXN2AP68543 259 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ICA1Q05084 483 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 KLHL30Q0D2K2 578 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 COASYQ13057 564 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 SFMBT2Q5VUG0 894 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 SND1Q7KZF4 910 aaKnown RBP eCLIP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ERMNQ8TAM6 284 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 DNAJC7Q99615 494 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 MMTAG2Q9BU76 263 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 NT5C3AQ9H0P0 336 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 SMARCAL1Q9NZC9 954 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 PKD2L1Q9P0L9 805 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 RCCD1A6NED2 376 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 SFI1A8K8P3 1242 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 NKRFO15226 690 aaKnown RBP eCLIP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 NCK2O43639 380 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 EEF2P13639 858 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CYP2C19P33261 490 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 SEPT2Q15019 361 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 GUF1Q8N442 669 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ZNF507Q8TCN5 953 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 PNMA5Q96PV4 448 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 RIOX1Q9H6W3 641 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 BLOC1S4Q9NUP1 217 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 DNM3Q9UQ16 869 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CEP83Q9Y592 693 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 PCDHB13Q9Y5F0 798 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 STRCQ7RTU9 1775 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 BCL9LQ86UU0 1499 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 PVALEFA0A1B0GWK0 134 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 POTEFA5A3E0 1075 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 EIF3CLB5ME19 914 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 TUBBP07437 444 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 POTEIP0CG38 1075 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 IL1R1P14778 569 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 TAL1P17542 331 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CDC37Q16543 378 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ZSCAN26Q16670 478 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 BEND6Q5SZJ8 279 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 POTEGQ6S5H5 508 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 POTEEQ6S8J3 1075 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 MAEAQ7L5Y9 396 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 TBC1D5Q92609 795 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 EIF3CQ99613 913 aaKnown RBP8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ANO3Q9BYT9 981 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 EMILIN3Q9NT22 766 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 ABCA3Q99758 1704 aa8.49□□□□□ -1.05
HDAC9-201ENST00000401921 CACNA1SQ13698 1873 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 H3BQF6 201 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 M0R2N6 131 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 EPHB6O15197 1021 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CLIC2O15247 247 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 GCNT3O95395 438 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 NR2F2P24468 414 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 CRKP46108 304 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 NT5C2P49902 561 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 HLTFQ14527 1009 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 NFRKBQ6P4R8 1299 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.05
HDAC9-201ENST00000401921 FAM133AQ8N9E0 248 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 NOX5Q96PH1 765 aa8.48□□□□□ -1.05
HDAC9-201ENST00000401921 QTRT2Q9H974 415 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms