RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 PI16Q6UXB8 463 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 SPATA31D4Q6ZUB0 917 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 FBXL16Q8N461 479 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 NCSTNQ92542 709 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 UTP4Q969X6 686 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DDX27Q96GQ7 796 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DDX23Q9BUQ8 820 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 TIPINQ9BVW5 301 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 IFIH1Q9BYX4 1025 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 THAP9Q9H5L6 903 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 CYP39A1Q9NYL5 469 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 VPS54Q9P1Q0 977 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 CTNNAL1Q9UBT7 734 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 TMEM98Q9Y2Y6 226 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 KCNA3P22001 575 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 FLT3P36888 993 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DNA2P51530 1060 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 NLRP5P59047 1200 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 RNASE9P60153 205 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 KBTBD12Q3ZCT8 623 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 RRAGBQ5VZM2 374 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 MIGA2Q7L4E1 593 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 KLHL7Q8IXQ5 586 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 PIGOQ8TEQ8 1089 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 PAGE5Q96GU1 130 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 PRMT1Q99873 361 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 NEUROG2Q9H2A3 272 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 PAIP2BQ9ULR5 123 aaKnown RBP9.53□□□□□ -0.88
RETREG1-202ENST00000399793 PCDHA13Q9Y5I0 950 aa9.53□□□□□ -0.88
RETREG1-202ENST00000399793 DLC1Q96QB1 1528 aa9.52□□□□□ -0.88
RETREG1-202ENST00000399793 A0A087X0B3 334 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 H0Y3Z8 333 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 PLEKP08567 350 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 TOB1P50616 345 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 PLOD1Q02809 727 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RASSF7Q02833 373 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RCN2Q14257 317 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 P3H1Q32P28 736 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RBBP8NLQ8NC74 664 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 LZICQ8WZA0 190 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 KCNN1Q92952 543 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CCDC42Q96M95 316 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 GSDMAQ96QA5 445 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 NUDCD1Q96RS6 583 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 NSRP1Q9H0G5 558 aaKnown RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CTTNBP2NLQ9P2B4 639 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RNF14Q9UBS8 474 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CHMP2BQ9UQN3 213 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 USP15Q9Y4E8 981 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 SLC4A7Q9Y6M7 1214 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 NRKQ7Z2Y5 1582 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RIMS1Q86UR5 1692 aaKnown RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 A0A1W2PQC6 194 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 SUPT3HO75486 399 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 MYL6BP14649 208 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 GM2AP17900 193 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 NAT1P18440 290 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CCNFP41002 786 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 IDI1Q13907 227 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 KLHDC7AQ5VTJ3 777 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 ANKRD13CQ8N6S4 541 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 LTV1Q96GA3 475 aaPredicted RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 CSRNP2Q9H175 543 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 PCDH18Q9HCL0 1135 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 SALL4Q9UJQ4 1053 aa9.52□□□□□ -0.89
RETREG1-202ENST00000399793 EDC4Q6P2E9 1401 aaKnown RBP9.52□□□□□ -0.89
RETREG1-202ENST00000399793 LGALS16A8MUM7 142 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 OAS1P00973 400 aaKnown RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 MYBP10242 640 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 HSPD1P10809 573 aaKnown RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 TRIM21P19474 475 aaKnown RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 IFNAR2P48551 515 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 LSAMPQ13449 338 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 MTMR3Q13615 1198 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 ZC2HC1CQ53FD0 456 aaPredicted RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 EPHA10Q5JZY3 1008 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 MEX3CQ5U5Q3 659 aaKnown RBP9.51□□□□□ -0.89
RETREG1-202ENST00000399793 CCDC80Q76M96 950 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 FITM2Q8N6M3 262 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 SUPT20HQ8NEM7 779 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 KLHDC4Q8TBB5 520 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 ZNF507Q8TCN5 953 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 SPIRE2Q8WWL2 714 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 STAMQ92783 540 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 PHKBQ93100 1093 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 FERMT2Q96AC1 680 aa9.51□□□□□ -0.89
RETREG1-202ENST00000399793 HIC2Q96JB3 615 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms