RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 IFNAR2P48551 515 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 MECOMQ03112 1051 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 NAA35Q5VZE5 725 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 C17orf53Q8N3J3 647 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 JPH2Q9BR39 696 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 EYA2O00167 538 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 ARIH2O95376 493 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 NFKBIAP25963 317 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 RECQLP46063 649 aaPredicted RBP12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 TFAP4Q01664 338 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 TMTC3Q6ZXV5 915 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 LRRC8CQ8TDW0 803 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 LZTS2Q9BRK4 669 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 CAPN10Q9HC96 672 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 SGK1O00141 431 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 LUC7L3O95232 432 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 LLGL1Q15334 1064 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 CALCRLQ16602 461 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 TRPV6Q9H1D0 765 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 HACL1Q9UJ83 578 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 XDHP47989 1333 aa12.04□□□□□ -0.48
CACNA1C-208ENST00000399601 CFAP69A5D8W1 941 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 LMNB1P20700 586 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 TEKT3Q9BXF9 490 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 KDRP35968 1356 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 SEC24DO94855 1032 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 DYNLT1P63172 113 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PDE1BQ01064 536 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 RLBP1P12271 317 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ACTN1P12814 892 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PLCD1P51178 756 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 SPAG1Q07617 926 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 GOLGA8FQ08AF8 430 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 FAM47AQ5JRC9 791 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PEX26Q7Z412 305 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 IGSF22Q8N9C0 903 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 CENPTQ96BT3 561 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PAPOLBQ9NRJ5 636 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 CYP2J2P51589 502 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 CCDC15Q0P6D6 951 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 DEPDC1Q5TB30 811 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 DSTYKQ6XUX3 929 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 P3H4Q92791 437 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 BCL2L14Q9BZR8 327 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 FAM49AQ9H0Q0 323 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 CHCHD3Q9NX63 227 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ZSCAN22P10073 491 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 OCA2Q04671 838 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 TBC1D8BQ0IIM8 1120 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 SPOPLQ6IQ16 392 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 CEP85Q6P2H3 762 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ZFP42Q96MM3 310 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 ATP11BQ9Y2G3 1177 aa12.03□□□□□ -0.48
CACNA1C-208ENST00000399601 TIMM10P62072 90 aa12.02□□□□□ -0.48
CACNA1C-208ENST00000399601 SLFN5Q08AF3 891 aa12.02□□□□□ -0.48
CACNA1C-208ENST00000399601 BACH2Q9BYV9 841 aa12.02□□□□□ -0.48
CACNA1C-208ENST00000399601 KITP10721 976 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 TRAF7Q6Q0C0 670 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 TMEM247A6NEH6 219 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 H0YCG3 227 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 N4BP1O75113 896 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 WDR47O94967 919 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 SERPIND1P05546 499 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 NNMTP40261 264 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 ARL4DP49703 201 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 WASHC5Q12768 1159 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 SREBF2Q12772 1141 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 NDUFB9Q9Y6M9 179 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 NBPF26B4DH59 902 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 TMED2Q15363 201 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 CCDC144BQ3MJ40 725 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 ATG16L1Q676U5 607 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 FRA10AC1Q70Z53 315 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 ARHGAP18Q8N392 663 aa12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 LSM14BQ9BX40 385 aaKnown RBP12.02□□□□□ -0.49
CACNA1C-208ENST00000399601 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms