RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 ICAM3P32942 547 aa16.6■□□□□ 0.25
COL13A1-204ENST00000398975 SCRN1Q12765 414 aa16.6■□□□□ 0.25
COL13A1-204ENST00000398975 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
COL13A1-204ENST00000398975 ZNF713Q8N859 430 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-204ENST00000398975 KAT2BQ92831 832 aa16.6■□□□□ 0.25
COL13A1-204ENST00000398975 MTG1Q9BT17 334 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-204ENST00000398975 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
COL13A1-204ENST00000398975 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
COL13A1-204ENST00000398975 GGPS1O95749 300 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 HOXD8P13378 290 aaPredicted RBP16.59■□□□□ 0.25
COL13A1-204ENST00000398975 BMP8BP34820 402 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 HSDL1Q3SXM5 330 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 BADQ92934 168 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 AIFM3Q96NN9 605 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 TRPV6Q9H1D0 765 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 UBIAD1Q9Y5Z9 338 aa16.59■□□□□ 0.25
COL13A1-204ENST00000398975 ESYT2A0FGR8 921 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 SPDYE3A6NKU9 549 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 DCDC2CA8MYV0 355 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 PFKFB2O60825 505 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 ATP9AO75110 1047 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 STAM2O75886 525 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 CTDNEP1O95476 244 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 TGFB3P10600 412 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 NBPF20Q3BBV1 942 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 XRRA1Q6P2D8 792 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 DHX37Q8IY37 1157 aaKnown RBP16.58■□□□□ 0.24
COL13A1-204ENST00000398975 PPTC7Q8NI37 304 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 ANO3Q9BYT9 981 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 ZMYND12Q9H0C1 365 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 TMEM39AQ9NV64 488 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 VPS54Q9P1Q0 977 aa16.58■□□□□ 0.24
COL13A1-204ENST00000398975 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 FIBPO43427 364 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 B4GALT4O60513 344 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 ZNF286BP0CG31 522 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 NEK4P51957 841 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 EPHB4P54760 987 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 ST3GAL1Q11201 340 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 ME3Q16798 604 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 KCNV1Q6PIU1 500 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 RASGRP4Q8TDF6 673 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 CRYGNQ8WXF5 182 aa16.57■□□□□ 0.24
COL13A1-204ENST00000398975 UMODL1Q5DID0 1318 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 MROH7Q68CQ1 1323 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 EDIL3O43854 480 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 KPNA6O60684 536 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 KCNA2P16389 499 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 SREBF1P36956 1147 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 SSRP1Q08945 709 aaKnown RBP16.56■□□□□ 0.24
COL13A1-204ENST00000398975 NPY5RQ15761 445 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 SPATA33Q96N06 139 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 UBE2OQ9C0C9 1292 aaKnown RBP16.56■□□□□ 0.24
COL13A1-204ENST00000398975 TRMT13Q9NUP7 481 aaKnown RBP16.56■□□□□ 0.24
COL13A1-204ENST00000398975 PRKAG2Q9UGJ0 569 aa16.56■□□□□ 0.24
COL13A1-204ENST00000398975 SOX1O00570 391 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 FOSP01100 380 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 AP3B2Q13367 1082 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 DGKDQ16760 1214 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 BRDTQ58F21 947 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 CYFIP1Q7L576 1253 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 TEX2Q8IWB9 1127 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 GPRASP2Q96D09 838 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 LBHD1Q9BQE6 289 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 C16orf70Q9BSU1 422 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 SLKQ9H2G2 1235 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-204ENST00000398975 JADE2Q9NQC1 790 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
COL13A1-204ENST00000398975 HAS3O00219 553 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 CPLX1O14810 134 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 EIF5BO60841 1220 aaKnown RBP16.54■□□□□ 0.24
COL13A1-204ENST00000398975 F2P00734 622 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 TIMP1P01033 207 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 ARP10275 920 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 CYP2C18P33260 490 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 CHMP4BP1P59074 171 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 AKAP17AQ02040 695 aaKnown RBP16.54■□□□□ 0.24
COL13A1-204ENST00000398975 HIC1Q14526 733 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 METTL7BQ6UX53 244 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 GPR20Q99678 358 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 MXRA8Q9BRK3 442 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 PPP1R12CQ9BZL4 782 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 MLXIPQ9HAP2 919 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 PKD2L1Q9P0L9 805 aa16.54■□□□□ 0.24
COL13A1-204ENST00000398975 FAM86B1E9PN63 330 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 PPFIA4O75335 1185 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 DEXIO95424 95 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 FAM86B2P0C5J1 330 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 CYP2C9P11712 490 aa16.53■□□□□ 0.24
COL13A1-204ENST00000398975 FDPSP14324 419 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms