RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 ASPRV1Q53RT3 343 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 MFSD14BQ5SR56 506 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 MSL1Q68DK7 614 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 GLIS3Q8NEA6 775 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 DRC1Q96MC2 740 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 MTMR4Q9NYA4 1195 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 ALDH1B1P30837 517 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 HOXA7P31268 230 aaPredicted RBP28.34■■■□□ 2.13
COL13A1-203ENST00000398969 PSMD2Q13200 908 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC27Q9C0I9 530 aa28.34■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC41Q15345 812 aa28.33■■■□□ 2.13
COL13A1-203ENST00000398969 CCDC70Q6NSX1 233 aa28.33■■■□□ 2.13
COL13A1-203ENST00000398969 LRRC47Q8N1G4 583 aaKnown RBP28.33■■■□□ 2.13
COL13A1-203ENST00000398969 RGPD3A6NKT7 1758 aaPredicted RBP28.32■■■□□ 2.12
COL13A1-203ENST00000398969 RGPD4Q7Z3J3 1758 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 FOXR2Q6PJQ5 311 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 SLF2Q8IX21 1173 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 ALS2CR12Q96Q35 445 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 TSG101Q99816 390 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 RIC8AQ9NPQ8 531 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 SNHG28P0DPA3 235 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 ATP2B2Q01814 1243 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 PDXDC1Q6P996 788 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 POTEAQ6S8J7 498 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 GPIHBP1Q8IV16 184 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 AFAP1L1Q8TED9 768 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 AENQ8WTP8 325 aaKnown RBP28.32■■■□□ 2.12
COL13A1-203ENST00000398969 OSBPL9Q96SU4 736 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 CRACR2AQ9BSW2 395 aa28.32■■■□□ 2.12
COL13A1-203ENST00000398969 PJA2O43164 708 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 ERCC3P19447 782 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 TNNI2P48788 182 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 ASTE1Q2TB18 679 aaPredicted RBP28.31■■■□□ 2.12
COL13A1-203ENST00000398969 GOLGA6L1Q8N7Z2 621 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 GGCXP38435 758 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 MAGEA1P43355 309 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 NFRKBQ6P4R8 1299 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 RIN2Q8WYP3 895 aaPredicted RBP28.31■■■□□ 2.12
COL13A1-203ENST00000398969 MASTLQ96GX5 879 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 EDEM3Q9BZQ6 932 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 FAM184BQ9ULE4 1060 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 HYOU1Q9Y4L1 999 aa28.31■■■□□ 2.12
COL13A1-203ENST00000398969 TCP1P17987 556 aaKnown RBP28.3■■■□□ 2.12
COL13A1-203ENST00000398969 EZH2Q15910 746 aaKnown RBP28.3■■■□□ 2.12
COL13A1-203ENST00000398969 ECM1Q16610 540 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 PPP4R3AQ6IN85 833 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 SPATA4Q8NEY3 305 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 TBC1D22AQ8WUA7 517 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 GPCPD1Q9NPB8 672 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 RIMBP2O15034 1052 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 KCNMA1Q12791 1236 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 ZCWPW2Q504Y3 356 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 FOCADQ5VW36 1801 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 MYOCDQ8IZQ8 938 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 CCDC155Q8N6L0 562 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 LRRC1Q9BTT6 524 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 TSPYL1Q9H0U9 437 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 LCMT1Q9UIC8 334 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 SALL4Q9UJQ4 1053 aa28.3■■■□□ 2.12
COL13A1-203ENST00000398969 A0A0U1RQG5 324 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 AGPSO00116 658 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 MAPK8IP2Q13387 824 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 UBE2SQ16763 222 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 PPP1R18Q6NYC8 613 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 CACNA2D4Q7Z3S7 1137 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 HDAC7Q8WUI4 952 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 RUBCNQ92622 972 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 DNAJC19Q96DA6 116 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 TANGO6Q9C0B7 1094 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 FEZ2Q9UHY8 353 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 COL11A2P13942 1736 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 IGKV6D-41A0A0C4DH26 115 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 AKR1B1P15121 316 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 EIF6P56537 245 aaKnown RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 GFPT1Q06210 699 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-203ENST00000398969 COASYQ13057 564 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 HGSNATQ68CP4 663 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 CLEC10AQ8IUN9 316 aa28.29■■■□□ 2.12
COL13A1-203ENST00000398969 SSU72P8A0A1W2PR75 194 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 GABPAQ06546 454 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 FOXR1Q6PIV2 292 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 LRRC31Q6UY01 552 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 SRLQ86TD4 932 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 HAS1Q92839 578 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 COA1Q9GZY4 146 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 JMJD4Q9H9V9 463 aa28.28■■■□□ 2.12
COL13A1-203ENST00000398969 DMGDHQ9UI17 866 aaKnown RBP28.28■■■□□ 2.12
COL13A1-203ENST00000398969 PNMA6FA0A0J9YX94 578 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 PPP1R11O60927 126 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-203ENST00000398969 CLK2P49760 499 aaKnown RBP28.27■■■□□ 2.12
COL13A1-203ENST00000398969 HINFPQ9BQA5 517 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 DDX25Q9UHL0 483 aaKnown RBP28.27■■■□□ 2.12
COL13A1-203ENST00000398969 DAGLAQ9Y4D2 1042 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 COL4A3BPQ9Y5P4 624 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 FKBP3Q00688 224 aaKnown RBP28.27■■■□□ 2.12
COL13A1-203ENST00000398969 DPP8Q6V1X1 898 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-203ENST00000398969 ARHGAP27Q6ZUM4 889 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 ANKRD13CQ8N6S4 541 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 PSMB7Q99436 277 aa28.27■■■□□ 2.12
COL13A1-203ENST00000398969 MYO1CO00159 1063 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms