RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 SEPT2Q15019 361 aa11.58□□□□□ -0.56
PCDHGA10-201ENST00000398610 CLUL1Q15846 466 aa11.58□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC84Q86UT8 332 aaPredicted RBP11.58□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZNF577Q9BSK1 485 aa11.58□□□□□ -0.56
PCDHGA10-201ENST00000398610 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
PCDHGA10-201ENST00000398610 SPDYE16A6NNV3 312 aaPredicted RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CAPN12Q6ZSI9 719 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC89Q8N998 374 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 IFIH1Q9BYX4 1025 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 FDPSP14324 419 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 STAT1P42224 750 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 ANTXR2P58335 489 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CUL4BQ13620 913 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZSCAN26Q16670 478 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 DPCR1Q3MIW9 517 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CASC4Q6P4E1 433 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CYB5R4Q7L1T6 521 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CLEC10AQ8IUN9 316 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC26Q8TAB7 109 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 UHMK1Q8TAS1 419 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZHX2Q9Y6X8 837 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L15C9J2P7 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L13C9JLJ4 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L11C9JVI0 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L18D6R9N7 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L22D6RA61 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L17D6RBQ6 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L19D6RCP7 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L20D6RJB6 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L24Q0WX57 530 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 NFX1Q12986 1120 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 MORC3Q14149 939 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 SFMBT2Q5VUG0 894 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L6PQ6QN14 398 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 CLEC4GQ6UXB4 293 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 PEX26Q7Z412 305 aa11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 TDRD7Q8NHU6 1098 aaKnown RBP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.57□□□□□ -0.56
PCDHGA10-201ENST00000398610 LRRN2O75325 713 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ARHGAP25P42331 645 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 RBBP5Q15291 538 aaKnown RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 VPS72Q15906 364 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 MTERF2Q49AM1 385 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 PHLDB2Q86SQ0 1253 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLC10A4Q96EP9 437 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 CEP170P1Q96L14 293 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 NCAPGQ9BPX3 1015 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 NUB1Q9Y5A7 615 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 GOLGA6BA6NDN3 693 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 TMOD1P28289 359 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 STAT2P52630 851 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 TMCO4Q5TGY1 634 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZBTB8OSQ8IWT0 167 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 WRNIP1Q96S55 665 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZNF215Q9UL58 517 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 AKT3Q9Y243 479 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 DDAH1O94760 285 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 RPN1P04843 607 aaKnown RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 TMEM191BP0C7N4 346 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 BCRP11274 1271 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 C4orf50Q6ZRC1 276 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 LINC00301Q8NCQ3 95 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ADPGKQ9BRR6 497 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 RNF26Q9BY78 433 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 FAM49AQ9H0Q0 323 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 RNF181Q9P0P0 153 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 MAN1A1P33908 653 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 CRKP46108 304 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 SDCCAG8Q86SQ7 713 aaPredicted RBP11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 COL4A3BPQ9Y5P4 624 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 NEDD4P46934 1319 aa11.56□□□□□ -0.56
PCDHGA10-201ENST00000398610 PLEKHG2Q9H7P9 1386 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SH2B2O14492 632 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 BRD3Q15059 726 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 LIN9Q5TKA1 542 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 DEFB132Q7Z7B7 95 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 MCF2L2Q86YR7 1114 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC105Q8IYK2 499 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 PPFIBP2Q8ND30 876 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC110Q8TBZ0 833 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLC7A3Q8WY07 619 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SPTLC3Q9NUV7 552 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 VIMP08670 466 aaKnown RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLC39A14Q15043 492 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms