RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 AENQ8WTP8 325 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 TRIM37O94972 964 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 CTNNA1P35221 906 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 PRKCIP41743 596 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 HYIQ5T013 277 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 CEP128Q6ZU80 1094 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 GBP5Q96PP8 586 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 NDST4Q9H3R1 872 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 NARFQ9UHQ1 456 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 PRKAB2O43741 272 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 MRPL12P52815 198 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 CORO7P57737 925 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 MUM1Q2TAK8 710 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 SLC9C1Q4G0N8 1177 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 KRT79Q5XKE5 535 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 WDR59Q6PJI9 974 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 NIP7Q9Y221 180 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 USH1CQ9Y6N9 552 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ZC3H4Q9UPT8 1303 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 PPP1R12BO60237 982 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 DDB1Q16531 1140 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 CFAP221Q4G0U5 840 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ZCWPW2Q504Y3 356 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 VSIG1Q86XK7 387 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 NOA1Q8NC60 698 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 AKAP11Q9UKA4 1901 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 NUP188Q5SRE5 1749 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ECM2O94769 699 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ZBTB16Q05516 673 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 SRBD1Q8N5C6 995 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 MGARPQ8TDB4 240 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 CCDC17Q96LX7 622 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 LACRTQ9GZZ8 138 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 A0A087X0B3 334 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 BCAMP50895 628 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 MTF1Q14872 753 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ASTE1Q2TB18 679 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 ASPRV1Q53RT3 343 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 LRRC55Q6ZSA7 311 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 DUSP9Q99956 384 aaKnown RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 IRX2Q9BZI1 471 aaPredicted RBP5.98□□□□□ -1.45
PTPRD-205ENST00000397611 RIOX1Q9H6W3 641 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 KDM3AQ9Y4C1 1321 aa5.98□□□□□ -1.45
PTPRD-205ENST00000397611 PRR29P0C7W0 189 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SESN3P58005 492 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 GRIPAP1Q4V328 841 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 RPUSD2Q8IZ73 545 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NOX5Q96PH1 765 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NOC4LQ9BVI4 516 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 IFIH1Q9BYX4 1025 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 YIPF3Q9GZM5 350 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 YY1AP1Q9H869 796 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 TTC7AQ9ULT0 858 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MINPP1Q9UNW1 487 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ZNF536O15090 1300 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MUTP22033 750 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ZNF131P52739 623 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 C2orf54Q08AI8 447 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 KRT71Q3SY84 523 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 RUFY4Q6ZNE9 571 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SUGP1Q8IWZ8 645 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 RNF168Q8IYW5 571 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SMC6Q96SB8 1091 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 PNKPQ96T60 521 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MKNK1Q9BUB5 465 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 EIF4E1BA6NMX2 242 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 FOSP01100 380 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 PRCPP42785 496 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NPEPPSP55786 919 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 GKAP1Q5VSY0 366 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NCAPH2Q6IBW4 605 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SV2BQ7L1I2 683 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ZC3H3Q8IXZ2 948 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SPATA4Q8NEY3 305 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 TCP11Q8WWU5 503 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 MBOAT7Q96N66 472 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 INPP4AQ96PE3 977 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 LRWD1Q9UFC0 647 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 COL1A1P02452 1464 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 TOM1O60784 492 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 LUC7L3O95232 432 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 RFX1P22670 979 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 HOXA10P31260 410 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 BIRC3Q13489 604 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 CDC37Q16543 378 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 PIK3AP1Q6ZUJ8 805 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ACRBPQ8NEB7 543 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 LMBR1Q8WVP7 490 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 ARHGEF2Q92974 986 aaKnown RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NAP1L3Q99457 506 aaPredicted RBP5.97□□□□□ -1.45
PTPRD-205ENST00000397611 CCDC77Q9BR77 488 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 BLZF1Q9H2G9 400 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 NKIRAS1Q9NYS0 192 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 SIK3Q9Y2K2 1263 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 FAM205AQ6ZU69 1335 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 GPR75-ASB3A0A0A6YYF3 556 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 H3BQF6 201 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 COBLO75128 1261 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 RPS6KA4O75676 772 aa5.97□□□□□ -1.45
PTPRD-205ENST00000397611 CIB2O75838 187 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms