RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
NUP98-206ENST00000397013 PLA2G6O60733 806 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 EIF5BO60841 1220 aaKnown RBP9.48□□□□□ -0.89
NUP98-206ENST00000397013 ICAM1P05362 532 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 GNAT2P19087 354 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 POU3F3P20264 500 aaPredicted RBP9.48□□□□□ -0.89
NUP98-206ENST00000397013 CALML3P27482 149 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 GUCA2AQ02747 115 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 PDE4BQ07343 736 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 CCDC96Q2M329 555 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 ZMYM1Q5SVZ6 1142 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 HERC6Q8IVU3 1022 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 PI4K2BQ8TCG2 481 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 FTOQ9C0B1 505 aaKnown RBP eCLIP9.48□□□□□ -0.89
NUP98-206ENST00000397013 NAPBQ9H115 298 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 RANBP17Q9H2T7 1088 aaKnown RBP9.48□□□□□ -0.89
NUP98-206ENST00000397013 CPVLQ9H3G5 476 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 VTA1Q9NP79 307 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 PCDHB3Q9Y5E6 796 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 MCM3APO60318 1980 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 TCF20Q9UGU0 1960 aaKnown RBP9.48□□□□□ -0.89
NUP98-206ENST00000397013 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
NUP98-206ENST00000397013 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 TSPY2A6NKD2 308 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 AP1G2O75843 785 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 ZFYP08048 801 aaPredicted RBP9.47□□□□□ -0.89
NUP98-206ENST00000397013 NOVP48745 357 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 DEFB103AP81534 67 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 GDPD5Q8WTR4 605 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 DHX38Q92620 1227 aaKnown RBP9.47□□□□□ -0.89
NUP98-206ENST00000397013 TMEM47Q9BQJ4 181 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 MTG1Q9BT17 334 aaPredicted RBP9.47□□□□□ -0.89
NUP98-206ENST00000397013 NACAP1Q9BZK3 213 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 ZNF287Q9HBT7 754 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 MTUS1Q9ULD2 1270 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
NUP98-206ENST00000397013 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.89
NUP98-206ENST00000397013 SUPT20HL2P0C7V6 817 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 RPS6P62753 249 aaKnown RBP9.46□□□□□ -0.9
NUP98-206ENST00000397013 LY6KQ17RY6 165 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 RRP12Q5JTH9 1297 aaKnown RBP9.46□□□□□ -0.9
NUP98-206ENST00000397013 SYDE2Q5VT97 1194 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 GDF6Q6KF10 455 aaPredicted RBP9.46□□□□□ -0.9
NUP98-206ENST00000397013 FAM117BQ6P1L5 589 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 RETREG2Q8NC44 543 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 KAT2BQ92831 832 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 WNT8BQ93098 351 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 FSD1Q9BTV5 496 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 RCAN3Q9UKA8 241 aa9.46□□□□□ -0.9
NUP98-206ENST00000397013 NBNO60934 754 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 SLC3A2P08195 630 aaKnown RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 GOLGA8HP0CJ92 632 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 CPT1AP50416 773 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 ZNF200P98182 395 aaPredicted RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 PUS10Q3MIT2 529 aaKnown RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 RNF207Q6ZRF8 634 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 DCAF4Q8WV16 495 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 KCTD12Q96CX2 325 aaKnown RBP9.45□□□□□ -0.9
NUP98-206ENST00000397013 C1QTNF1Q9BXJ1 281 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 SEZ6LQ9BYH1 1024 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 UBA5Q9GZZ9 404 aa9.45□□□□□ -0.9
NUP98-206ENST00000397013 MYH8P13535 1937 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 NCOR1O75376 2440 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 SORBS3O60504 671 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 PFKMP08237 780 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 ACTN1P12814 892 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 EDNRBP24530 442 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 HAND2P61296 217 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 PTGISQ16647 500 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 AAK1Q2M2I8 961 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 USH1GQ495M9 461 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 NFRKBQ6P4R8 1299 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 CCDC62Q6P9F0 684 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 PRR7Q8TB68 274 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 PHOSPHO2Q8TCD6 241 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 ANKS1AQ92625 1134 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 GPATCH3Q96I76 525 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 FAM227BQ96M60 508 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 TAAR1Q96RJ0 339 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 SLC9A7Q96T83 725 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 USB1Q9BQ65 265 aaKnown RBP9.44□□□□□ -0.9
NUP98-206ENST00000397013 OSBPL7Q9BZF2 842 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 SUGCTQ9HAC7 445 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 TOMM22Q9NS69 142 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 COL20A1Q9P218 1284 aa9.44□□□□□ -0.9
NUP98-206ENST00000397013 ADD3Q9UEY8 706 aaKnown RBP9.44□□□□□ -0.9
NUP98-206ENST00000397013 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 ORC4O43929 436 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 FGAP02671 866 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 FGRP09769 529 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 PDHBP11177 359 aa9.43□□□□□ -0.9
NUP98-206ENST00000397013 RFC2P35250 354 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms