RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 GDF3Q9NR23 364 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 FAM169AQ9Y6X4 670 aa14.75□□□□□ -0.05
TRIM40-207ENST00000396581 PVALEFA0A1B0GWK0 134 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 H0YIN7 160 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 PAFAH1B1P43034 410 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 GNGT1P63211 74 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 TFAP4Q01664 338 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 C12orf60Q5U649 245 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 KLHDC7AQ5VTJ3 777 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 MMS22LQ6ZRQ5 1243 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 DZIP1Q86YF9 867 aaKnown RBP14.74□□□□□ -0.05
TRIM40-207ENST00000396581 CD302Q8IX05 232 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 IQCKQ8N0W5 287 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 MREGQ8N565 214 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 EEF2KMTQ96G04 330 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 LZTS2Q9BRK4 669 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 PAGR1Q9BTK6 254 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 SALL4Q9UJQ4 1053 aa14.74□□□□□ -0.05
TRIM40-207ENST00000396581 FGFR1OPO95684 399 aaKnown RBP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 UNC13DQ70J99 1090 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 GUF1Q8N442 669 aaKnown RBP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 ARL8AQ96BM9 186 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 SPZ1Q9BXG8 430 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 COA1Q9GZY4 146 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 SHTN1A0MZ66 631 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 LRRC53A6NM62 1247 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 HSF2BPO75031 334 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 GTF2A1P52655 376 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 GSTO1P78417 241 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 SLC7A5Q01650 507 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 LRRC63Q05C16 580 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 SWT1Q5T5J6 900 aaKnown RBP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 HGSNATQ68CP4 663 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 PDXDC1Q6P996 788 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 POTEDQ86YR6 584 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 TBC1D22AQ8WUA7 517 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 ZNF622Q969S3 477 aaKnown RBP eCLIP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 TMX4Q9H1E5 349 aaPredicted RBP14.73□□□□□ -0.05
TRIM40-207ENST00000396581 EHD4Q9H223 541 aa14.73□□□□□ -0.05
TRIM40-207ENST00000396581 COL11A2P13942 1736 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 AKR1B10O60218 316 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 ERLIN2O94905 339 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 MAGEA1P43355 309 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 EHHADHQ08426 723 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 NONOQ15233 471 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 GRIK5Q16478 980 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 CCDC181Q5TID7 509 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 C8orf74Q6P047 294 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 DPP8Q6V1X1 898 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 LRRC55Q6ZSA7 311 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 HEATR3Q7Z4Q2 680 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 SYN2Q92777 582 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 MTMR8Q96EF0 704 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 ZIM3Q96PE6 472 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 ZC3H12CQ9C0D7 883 aaKnown RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 PDGFDQ9GZP0 370 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 DEF6Q9H4E7 631 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 RBM12Q9NTZ6 932 aaKnown RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 BLOC1S4Q9NUP1 217 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 STK17AQ9UEE5 414 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 CCDC88AQ3V6T2 1871 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 PPP4CP60510 307 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 KDM7AQ6ZMT4 941 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 SPATS2Q86XZ4 545 aaKnown RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 MICALL1Q8N3F8 863 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 KAT2BQ92831 832 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 NOX5Q96PH1 765 aa14.72□□□□□ -0.05
TRIM40-207ENST00000396581 FAM207AQ9NSI2 230 aaPredicted RBP14.72□□□□□ -0.05
TRIM40-207ENST00000396581 GRID2IPA4D2P6 1211 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 LDHCP07864 332 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 USP17L8P0C7I0 530 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 GRB10Q13322 594 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 CFAP221Q4G0U5 840 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 MFSD14BQ5SR56 506 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 NEK8Q86SG6 692 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 CCDC125Q86Z20 511 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 IFT20Q8IY31 132 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 SLC16A10Q8TF71 515 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 CNKSR1Q969H4 720 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 FAM163AQ96GL9 167 aaPredicted RBP14.71□□□□□ -0.05
TRIM40-207ENST00000396581 DRC1Q96MC2 740 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 CEP89Q96ST8 783 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 SLC39A2Q9NP94 309 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 MCM9Q9NXL9 1143 aa14.71□□□□□ -0.05
TRIM40-207ENST00000396581 MYMKA6NI61 221 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 SRRM3A6NNA2 597 aaPredicted RBP14.7□□□□□ -0.06
TRIM40-207ENST00000396581 CCNT1O60563 726 aaKnown RBP14.7□□□□□ -0.06
TRIM40-207ENST00000396581 SMARCA1P28370 1054 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 CXCR5P32302 372 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 B4GALNT4Q76KP1 1039 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 SV2BQ7L1I2 683 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 RRAGAQ7L523 313 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 HPS3Q969F9 1004 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 MTMR9Q96QG7 549 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 RUFY1Q96T51 708 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 HINFPQ9BQA5 517 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 NUCKS1Q9H1E3 243 aaKnown RBP14.7□□□□□ -0.06
TRIM40-207ENST00000396581 MMRN2Q9H8L6 949 aa14.7□□□□□ -0.06
TRIM40-207ENST00000396581 SMARCAL1Q9NZC9 954 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms