RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 APOBEC3HQ6NTF7 200 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 DPP8Q6V1X1 898 aaPredicted RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 SH2D3CQ8N5H7 860 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 LRRC1Q9BTT6 524 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 DMGDHQ9UI17 866 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 RRP15Q9Y3B9 282 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 GREB1LQ9C091 1923 aaPredicted RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 LDHCP07864 332 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 LLGL1Q15334 1064 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 TTBK2Q6IQ55 1244 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 IPO4Q8TEX9 1081 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 SECISBP2LQ93073 1101 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 LIMA1Q9UHB6 759 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 IGKV6D-41A0A0C4DH26 115 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 H7C1D1 291 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 BMP15O95972 392 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 KRT18P05783 430 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 PDHBP11177 359 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 PYGBP11216 843 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 CALML3P27482 149 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 SHMT1P34896 483 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 ACTN2P35609 894 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 IKQ13123 557 aaPredicted RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 R3HDM1Q15032 1099 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 CCDC40Q4G0X9 1142 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 CDC42EP5Q6NZY7 148 aa10.31□□□□□ -0.76
NDE1-201ENST00000396354 CCDC47Q96A33 483 aaKnown RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 FEZ2Q9UHY8 353 aaPredicted RBP10.31□□□□□ -0.76
NDE1-201ENST00000396354 TRAF5O00463 557 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 BACH1O14867 736 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 ADAT2Q7Z6V5 191 aaKnown RBP10.3□□□□□ -0.76
NDE1-201ENST00000396354 KLHL7Q8IXQ5 586 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 LRRC53A6NM62 1247 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 MEIS1O00470 390 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 ZBTB7AO95365 584 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 OR52Z1P0C646 297 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 EPS15P42566 896 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 CCT5P48643 541 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 WHAMMP3Q1A5X7 153 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 TCERG1LQ5VWI1 586 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 P2RX5Q93086 422 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 RUFY1Q96T51 708 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 SELENOOQ9BVL4 669 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 MTMR4Q9NYA4 1195 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 CWC15Q9P013 229 aaKnown RBP10.3□□□□□ -0.76
NDE1-201ENST00000396354 MYH4Q9Y623 1939 aa10.3□□□□□ -0.76
NDE1-201ENST00000396354 ZNF263O14978 683 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 CHRNA5P30532 468 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 LONP1P36776 959 aaKnown RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 RAPGEF1Q13905 1077 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 TRADDQ15628 312 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 TBC1D10BQ4KMP7 808 aaPredicted RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 CALML4Q96GE6 196 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 DUSP9Q99956 384 aaKnown RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 TRIM9Q9C026 710 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 ZMYND12Q9H0C1 365 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 SH3GLB2Q9NR46 395 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
NDE1-201ENST00000396354 TMCO5BA8MYB1 307 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 SLC37A4O43826 429 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 TRAPPC10P48553 1259 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 JAG1P78504 1218 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 TCP10Q12799 353 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 NONOQ15233 471 aaKnown RBP eCLIP10.29□□□□□ -0.76
NDE1-201ENST00000396354 TMED8Q6PL24 325 aaPredicted RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 DAGLBQ8NCG7 672 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 AFAP1L1Q8TED9 768 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 MYH10P35580 1976 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 GOLGA6BA6NDN3 693 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 KLRC4O43908 158 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 ATP2C2O75185 946 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 KRT14P02533 472 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 HPDP32754 393 aaPredicted RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 SLC1A4P43007 532 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 MAGEA1P43355 309 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 LIG3P49916 1009 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 KRT83P78385 493 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 HLTFQ14527 1009 aaKnown RBP eCLIP10.29□□□□□ -0.76
NDE1-201ENST00000396354 TTI2Q6NXR4 508 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 KCNK18Q7Z418 384 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 REXO1Q8N1G1 1221 aaKnown RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 KIAA0895Q8NCT3 520 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 MMTAG2Q9BU76 263 aaKnown RBP10.29□□□□□ -0.76
NDE1-201ENST00000396354 COA1Q9GZY4 146 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 RASSF4Q9H2L5 321 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 HAUS4Q9H6D7 363 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 HYOU1Q9Y4L1 999 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 PLIN4Q96Q06 1357 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 SMCHD1A6NHR9 2005 aa10.29□□□□□ -0.76
NDE1-201ENST00000396354 GOLGA6CA6NDK9 693 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 MAP2K7O14733 419 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 GOLGA6DP0CG33 693 aa10.28□□□□□ -0.76
NDE1-201ENST00000396354 NOP2P46087 812 aaKnown RBP10.28□□□□□ -0.76
NDE1-201ENST00000396354 DNM2P50570 870 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms