RNA–Protein interactions for RNA: ENST00000396340.1

CDKN1B-202, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3 BASIC

Gene CDKN1B, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-202ENST00000396340 TRIM43Q96BQ3 446 aaPredicted RBP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 ALDH8A1Q9H2A2 487 aaPredicted RBP22.15■■□□□ 1.14
CDKN1B-202ENST00000396340 NOP56O00567 594 aaKnown RBP22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 CDKL5O76039 1030 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 ARIH2O95376 493 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 IFNAR1P17181 557 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 METTL7BQ6UX53 244 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 SESTD1Q86VW0 696 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 AFG1LQ8WV93 481 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 BADQ92934 168 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 MTIF3Q9H2K0 278 aaKnown RBP22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 C6orf50Q9HD87 102 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 SH3GLB2Q9NR46 395 aa22.14■■□□□ 1.13
CDKN1B-202ENST00000396340 SMCO2A6NFE2 343 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 SPATA31C2B4DYI2 1134 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 SLC34A2O95436 690 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 PARNO95453 639 aaKnown RBP22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 ADD1P35611 737 aaKnown RBP22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 COL9A3Q14050 684 aaPredicted RBP22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 WWC2Q6AWC2 1192 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 RAB11FIP4Q86YS3 637 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 SPATA33Q96N06 139 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 PDRG1Q9NUG6 133 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 PCDHA6Q9UN73 950 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 NOD1Q9Y239 953 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 PCDHA8Q9Y5H6 950 aa22.13■■□□□ 1.13
CDKN1B-202ENST00000396340 RGS20O76081 388 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 GGPS1O95749 300 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 PFKMP08237 780 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 HOXD8P13378 290 aaPredicted RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 PDIA3P30101 505 aaKnown RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 CDC27P30260 824 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 IRX5P78411 483 aaPredicted RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 RPUSD2Q8IZ73 545 aaKnown RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 TNPO1Q92973 898 aaKnown RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 HIPK3Q9H422 1215 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 FAM217BQ9NTX9 383 aaPredicted RBP22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 KAT6AQ92794 2004 aa22.12■■□□□ 1.13
CDKN1B-202ENST00000396340 STXBP3O00186 592 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 CPA1P15085 419 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 UBA1P22314 1058 aaKnown RBP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 MRPS9P82933 396 aaKnown RBP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 BFSP2Q13515 415 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 NBPF20Q3BBV1 942 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 TMEM63BQ5T3F8 832 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 PSRC1Q6PGN9 363 aaPredicted RBP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 SH3RF1Q7Z6J0 888 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 C7orf31Q8N865 590 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 COPS5Q92905 334 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 GPKOWQ92917 476 aaPredicted RBP eCLIP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 IL17RAQ96F46 866 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 ZMYND12Q9H0C1 365 aa22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 ZNF215Q9UL58 517 aaPredicted RBP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 RANBP2P49792 3224 aaKnown RBP22.11■■□□□ 1.13
CDKN1B-202ENST00000396340 PITPNM1O00562 1244 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 B4GALT4O60513 344 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 F2P00734 622 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 XBP1P17861 261 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 MTMR1Q13613 665 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 FAM47CQ5HY64 1035 aa22.1■■□□□ 1.13
CDKN1B-202ENST00000396340 GRIN2DO15399 1336 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 hCG_1642624A0A1W2PR95 340 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 RFC2P35250 354 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 SSRP1Q08945 709 aaKnown RBP22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 TOB2Q14106 344 aaPredicted RBP22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 GALNT17Q6IS24 598 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 RETREG2Q8NC44 543 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 IL31RAQ8NI17 732 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 CAGE1Q8TC20 777 aa22.09■■□□□ 1.13
CDKN1B-202ENST00000396340 DEXIO95424 95 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 GNAT1P11488 350 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 PSMC6P62333 389 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 NIPA1Q7RTP0 329 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 REXO1Q8N1G1 1221 aaKnown RBP22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 JADE2Q9NQC1 790 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 RTEL1Q9NZ71 1219 aa22.08■■□□□ 1.13
CDKN1B-202ENST00000396340 SREBF1P36956 1147 aa22.07■■□□□ 1.12
CDKN1B-202ENST00000396340 NTRK3Q16288 839 aa22.07■■□□□ 1.12
CDKN1B-202ENST00000396340 HSDL1Q3SXM5 330 aa22.07■■□□□ 1.12
CDKN1B-202ENST00000396340 UPF3BQ9BZI7 483 aaKnown RBP22.07■■□□□ 1.12
CDKN1B-202ENST00000396340 UBIAD1Q9Y5Z9 338 aa22.07■■□□□ 1.12
CDKN1B-202ENST00000396340 H3BRB1 525 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 ZNF76P36508 570 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 CLK2P49760 499 aaKnown RBP22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 PSEN2P49810 448 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 MFSD10Q14728 455 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 UBE2SQ16763 222 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 CEP55Q53EZ4 464 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 WASF1Q92558 559 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 NOC4LQ9BVI4 516 aaKnown RBP22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 SLC26A6Q9BXS9 759 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 ANO3Q9BYT9 981 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 TRPV6Q9H1D0 765 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 SLKQ9H2G2 1235 aaPredicted RBP22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 TUT1Q9H6E5 874 aaKnown RBP22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 GTF2IRD1Q9UHL9 959 aa22.06■■□□□ 1.12
CDKN1B-202ENST00000396340 HAS3O00219 553 aa22.05■■□□□ 1.12
CDKN1B-202ENST00000396340 RPLP2P05387 115 aaKnown RBP22.05■■□□□ 1.12
CDKN1B-202ENST00000396340 SMAD3P84022 425 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms