RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 KLHL10Q6JEL2 608 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 ZNF662Q6ZS27 426 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 LONP2Q86WA8 852 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 SLC4A9Q96Q91 983 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 COL22A1Q8NFW1 1626 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 NBPF26B4DH59 902 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 BACH1O14867 736 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 GYPCP04921 128 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 KRT16P08779 473 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 RARAP10276 462 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 FXR1P51114 621 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 FMR1Q06787 632 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 MAP7D1Q3KQU3 841 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 LONRF3Q496Y0 759 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 HAUS3Q68CZ6 603 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 DNAJC10Q8IXB1 793 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 SPATA4Q8NEY3 305 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 WDR60Q8WVS4 1066 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 ECT2Q9H8V3 914 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 ARHGEF3Q9NR81 526 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 ABHD10Q9NUJ1 306 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 CROTQ9UKG9 612 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 PLAAQ9Y263 795 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 FRMD4BQ9Y2L6 1034 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 EPN1Q9Y6I3 576 aaPredicted RBP10.6□□□□□ -0.71
CDRT1-204ENST00000395906 COMMD3-BMI1R4GMX3 469 aa10.6□□□□□ -0.71
CDRT1-204ENST00000395906 HEG1Q9ULI3 1381 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 ATP5J2-PTCD1G3V325 749 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 NDUFA10O95299 355 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 BMP6P22004 513 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 KRT32Q14532 448 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CCDC122Q5T0U0 273 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 STKLD1Q8NE28 680 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 FAM136AQ96C01 138 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 HIC2Q96JB3 615 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PUS3Q9BZE2 481 aaKnown RBP10.59□□□□□ -0.71
CDRT1-204ENST00000395906 RAB17Q9H0T7 212 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PDP2Q9P2J9 529 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 REXO2Q9Y3B8 237 aaKnown RBP10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 SLIT2O94813 1529 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 TRIM43BA6NCK2 446 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CETN3O15182 167 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 P4HA2O15460 535 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 ATP9BO43861 1147 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 ALDH1L1O75891 902 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 KCNA4P22459 653 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CALB2P22676 271 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 SMARCA1P28370 1054 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 SERPINB4P48594 390 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 RAD23BP54727 409 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 P3H1Q32P28 736 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 SLC44A4Q53GD3 710 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PIGWQ7Z7B1 504 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CREG2Q8IUH2 290 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 ATP8B4Q8TF62 1192 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 DNAJC9Q8WXX5 260 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CENPTQ96BT3 561 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 KLHL29Q96CT2 875 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CTAGE1Q96RT6 745 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 MIS12Q9H081 205 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 RNPEPL1Q9HAU8 725 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PLCB1Q9NQ66 1216 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 SAMSN1Q9NSI8 373 aaKnown RBP10.59□□□□□ -0.71
CDRT1-204ENST00000395906 CHMP2BQ9UQN3 213 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 HPSEQ9Y251 543 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 R3HDM2Q9Y2K5 976 aaKnown RBP10.59□□□□□ -0.71
CDRT1-204ENST00000395906 PCDHA5Q9Y5H7 936 aa10.59□□□□□ -0.71
CDRT1-204ENST00000395906 ABCC12Q96J65 1359 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 MYH8P13535 1937 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 MROH7-TTC4A0A0A0MT08 1334 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 HIP1O00291 1037 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 FAM153BP0C7A2 387 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 IDEP14735 1019 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 HOXA10P31260 410 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 CD97P48960 835 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 FAM153CQ494X1 144 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 ODF2Q5BJF6 829 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 THOC7Q6I9Y2 204 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 APTXQ7Z2E3 356 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 RNF10Q8N5U6 811 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 RHPN1Q8TCX5 695 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 IQCDQ96DY2 449 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 NR1H4Q96RI1 486 aaPredicted RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 SMC6Q96SB8 1091 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 TCHPQ9BT92 498 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 USP44Q9H0E7 712 aa10.58□□□□□ -0.72
CDRT1-204ENST00000395906 CNOT10Q9H9A5 744 aaKnown RBP10.58□□□□□ -0.72
CDRT1-204ENST00000395906 GDF3Q9NR23 364 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms