RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 CDHR1Q96JP9 859 aa7.24□□□□□ -1.25
SMARCAD1-203ENST00000394961 PRDM12Q9H4Q4 367 aa7.24□□□□□ -1.25
SMARCAD1-203ENST00000394961 RNF216Q9NWF9 866 aaPredicted RBP7.24□□□□□ -1.25
SMARCAD1-203ENST00000394961 TET1Q8NFU7 2136 aa7.24□□□□□ -1.25
SMARCAD1-203ENST00000394961 FIBPO43427 364 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 COL1A2P08123 1366 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 CALM1P0DP23 149 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 CALM2P0DP24 149 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 CALM3P0DP25 149 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 GNAT1P11488 350 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 CALML3P27482 149 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 LIFRP42702 1097 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 GNAQP50148 359 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 METTL7BQ6UX53 244 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 MAP4K1Q92918 833 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 EHMT1Q9H9B1 1298 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 EPB41L2O43491 1005 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 SLC35G1Q2M3R5 365 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 IGDCC4Q8TDY8 1250 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 AFG1LQ8WV93 481 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 TMEM87BQ96K49 555 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 TGS1Q96RS0 853 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 DIAPH3Q9NSV4 1193 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 MKI67P46013 3256 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 GTPBP6O43824 516 aaPredicted RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 RAD21O60216 631 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 KDM4AO75164 1064 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 LINC00271P0C7V0 271 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 PLA2G5P39877 138 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 GRB10Q13322 594 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 TIGD5Q53EQ6 642 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 IFIT1BQ5T764 474 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 ARHGEF16Q5VV41 709 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 NEK9Q8TD19 979 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 VTI1AQ96AJ9 217 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 PURBQ96QR8 312 aaKnown RBP7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 INSL6Q9Y581 213 aa7.23□□□□□ -1.25
SMARCAD1-203ENST00000394961 GRXCR1A8MXD5 290 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 GCOM1H8Y6P7 765 aaPredicted RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SGSM2O43147 1006 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 AMHP03971 560 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 POLR2MP0CAP2 368 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 UBA1P22314 1058 aaKnown RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 IKBKEQ14164 716 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 GNPTABQ3T906 1256 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SGMS1Q86VZ5 419 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 CLP1Q92989 425 aaKnown RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 KCNJ6P48051 423 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 CYB5R4Q7L1T6 521 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 KCNB2Q92953 911 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 ZNF689Q96CS4 500 aaPredicted RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 MRPL38Q96DV4 380 aaKnown RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 UHRF1Q96T88 793 aaPredicted RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 UBAC1Q9BSL1 405 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 USP26Q9BXU7 913 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 GLT8D2Q9H1C3 349 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 UBIAD1Q9Y5Z9 338 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 TTC3P53804 2025 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 NRCAMQ92823 1304 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 LINC01553A4QN01 128 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 KLRF2D3W0D1 207 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 H3BNC9 293 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 ATG7O95352 703 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 IGHDP01880 384 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 CYP2C9P11712 490 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 CHMLP26374 656 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 CCL23P55773 120 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SNAP25P60880 206 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SEMA3FQ13275 785 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 MBTPS1Q14703 1052 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 TAF2Q6P1X5 1199 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 NCOA7Q8NI08 942 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 P2RX5Q93086 422 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 TOP1MTQ969P6 601 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 SCLYQ96I15 445 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 GPR20Q99678 358 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 HDAC6Q9UBN7 1215 aa7.22□□□□□ -1.25
SMARCAD1-203ENST00000394961 IGKV6D-21A0A0A0MT36 114 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 C17orf102A2RUQ5 167 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 EPOPA6NHQ4 379 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 B4E1Z4 1266 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 CA3P07451 260 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 GSPT1P15170 499 aaKnown RBP7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 C7orf31Q8N865 590 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 COPS5Q92905 334 aa7.21□□□□□ -1.25
SMARCAD1-203ENST00000394961 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 CYTH3O43739 400 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 SLC26A2P50443 739 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 LY6KQ17RY6 165 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 TCTN1Q2MV58 587 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 NOL8Q76FK4 1167 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 OTOP2Q7RTS6 562 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 DHX37Q8IY37 1157 aaKnown RBP7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 HLA-CQ95604 372 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 FAM161BQ96MY7 647 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 LGALS2P05162 132 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 PDE4AP27815 886 aa7.21□□□□□ -1.26
SMARCAD1-203ENST00000394961 KIF5BP33176 963 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms