RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 SNAP23O00161 211 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 RAD51CO43502 376 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 OR52Z1P0C646 297 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 EZRP15311 586 aaKnown RBP25.05■■□□□ 1.6
RARA-202ENST00000394081 HSD17B3P37058 310 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 ORC2Q13416 577 aaPredicted RBP25.05■■□□□ 1.6
RARA-202ENST00000394081 BANK1Q8NDB2 785 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 FBXO41Q8TF61 875 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 MIEF2Q96C03 454 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 CALR3Q96L12 384 aaKnown RBP25.05■■□□□ 1.6
RARA-202ENST00000394081 PLIN2Q99541 437 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 OSBPL7Q9BZF2 842 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 PPANQ9NQ55 473 aaKnown RBP25.05■■□□□ 1.6
RARA-202ENST00000394081 CYP2D7A0A087X1C5 515 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 GCFC2P16383 781 aaKnown RBP25.05■■□□□ 1.6
RARA-202ENST00000394081 CACNA2D3Q8IZS8 1091 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 PROM2Q8N271 834 aa25.05■■□□□ 1.6
RARA-202ENST00000394081 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.04■■□□□ 1.6
RARA-202ENST00000394081 TXNRD1Q16881 649 aa25.04■■□□□ 1.6
RARA-202ENST00000394081 UNC13DQ70J99 1090 aa25.04■■□□□ 1.6
RARA-202ENST00000394081 ZNF622Q969S3 477 aaKnown RBP eCLIP25.04■■□□□ 1.6
RARA-202ENST00000394081 NKRFO15226 690 aaKnown RBP eCLIP25.03■■□□□ 1.63e-6■■□□□ 12
RARA-202ENST00000394081 DNAJC8O75937 253 aaPredicted RBP25.03■■□□□ 1.6
RARA-202ENST00000394081 IGHMBP2P38935 993 aaKnown RBP25.03■■□□□ 1.6
RARA-202ENST00000394081 PPP2R2AP63151 447 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 CRYMQ14894 314 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 INF2Q27J81 1249 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 TDRD12Q587J7 1177 aaKnown RBP25.03■■□□□ 1.6
RARA-202ENST00000394081 SFMBT2Q5VUG0 894 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 N4BP2L2Q92802 583 aaPredicted RBP25.03■■□□□ 1.6
RARA-202ENST00000394081 SEC16BQ96JE7 1060 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 PBKQ96KB5 322 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 CARD10Q9BWT7 1032 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 KDM4CQ9H3R0 1056 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 RIC8AQ9NPQ8 531 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 STK17AQ9UEE5 414 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 ECHS1P30084 290 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 HPDP32754 393 aaPredicted RBP25.03■■□□□ 1.6
RARA-202ENST00000394081 SLC18A3Q16572 532 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 ATP6V0A4Q9HBG4 840 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 ABCF2Q9UG63 623 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 ATP6V0A2Q9Y487 856 aa25.03■■□□□ 1.6
RARA-202ENST00000394081 USP17L12C9JPN9 530 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 USP17L21D6R901 530 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 ZNF844Q08AG5 666 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 RASGRP4Q8TDF6 673 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 TAF4BQ92750 862 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 TATDN2Q93075 761 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 CALML4Q96GE6 196 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 SWAP70Q9UH65 585 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 BAZ2BQ9UIF8 2168 aaKnown RBP25.02■■□□□ 1.6
RARA-202ENST00000394081 C10orf76Q5T2E6 689 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 RCSD1Q6JBY9 416 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 LRRC55Q6ZSA7 311 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 DGKHQ86XP1 1220 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 ACTRT1Q8TDG2 376 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 SCFD2Q8WU76 684 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 ANKS1AQ92625 1134 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 GPKOWQ92917 476 aaPredicted RBP eCLIP25.02■■□□□ 1.6
RARA-202ENST00000394081 CENPHQ9H3R5 247 aa25.02■■□□□ 1.6
RARA-202ENST00000394081 CNOT10Q9H9A5 744 aaKnown RBP25.02■■□□□ 1.6
RARA-202ENST00000394081 DNM1LO00429 736 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 ERCC3P19447 782 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 ERVK-9P63128 1117 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 SBK1Q52WX2 424 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 SV2BQ7L1I2 683 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 STAG2Q8N3U4 1231 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 BARHL2Q9NY43 387 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 LEMD3Q9Y2U8 911 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 COL5A2P05997 1499 aaPredicted RBP25.01■■□□□ 1.59
RARA-202ENST00000394081 CYP19A1P11511 503 aaPredicted RBP25.01■■□□□ 1.59
RARA-202ENST00000394081 ATF3P18847 181 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 CTNNA1P35221 906 aaKnown RBP25.01■■□□□ 1.59
RARA-202ENST00000394081 SCTRP47872 440 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 PSMD2Q13200 908 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 HLTFQ14527 1009 aaKnown RBP eCLIP25.01■■□□□ 1.59
RARA-202ENST00000394081 UAP1Q16222 522 aaPredicted RBP25.01■■□□□ 1.59
RARA-202ENST00000394081 CCDC152Q4G0S7 254 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 SPDYCQ5MJ68 293 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 GKAP1Q5VSY0 366 aaPredicted RBP25.01■■□□□ 1.59
RARA-202ENST00000394081 KRT25Q7Z3Z0 450 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 CENPTQ96BT3 561 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 TSG101Q99816 390 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 POLD4Q9HCU8 107 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 SLC39A2Q9NP94 309 aa25.01■■□□□ 1.59
RARA-202ENST00000394081 MGRN1O60291 552 aa25■■□□□ 1.59
RARA-202ENST00000394081 NMT2O60551 498 aa25■■□□□ 1.59
RARA-202ENST00000394081 FTCDO95954 541 aa25■■□□□ 1.59
RARA-202ENST00000394081 KLRC1P26715 233 aa25■■□□□ 1.59
RARA-202ENST00000394081 DYNLL1P63167 89 aaKnown RBP25■■□□□ 1.59
RARA-202ENST00000394081 GRM4Q14833 912 aa25■■□□□ 1.59
RARA-202ENST00000394081 IFI16Q16666 785 aaKnown RBP25■■□□□ 1.59
RARA-202ENST00000394081 ATP8A2Q9NTI2 1148 aa25■■□□□ 1.59
RARA-202ENST00000394081 ARPP21Q9UBL0 812 aaPredicted RBP25■■□□□ 1.59
RARA-202ENST00000394081 TPX2Q9ULW0 747 aaKnown RBP25■■□□□ 1.59
RARA-202ENST00000394081 ATP8B3O60423 1300 aa24.99■■□□□ 1.59
RARA-202ENST00000394081 CCDC188H7C350 402 aa24.99■■□□□ 1.59
RARA-202ENST00000394081 KCNMA1Q12791 1236 aa24.99■■□□□ 1.59
RARA-202ENST00000394081 FAM83BQ5T0W9 1011 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms