RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TGS1Q96RS0 853 aaKnown RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 ZSCAN10Q96SZ4 725 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 ARIH1Q9Y4X5 557 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-202ENST00000393773 C5orf42Q9H799 3197 aa17.94■□□□□ 0.46
CHMP3-202ENST00000393773 MUC6Q6W4X9 2439 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 B4E1Z4 1266 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 NR3C2P08235 984 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 ZNF200P98182 395 aaPredicted RBP17.93■□□□□ 0.46
CHMP3-202ENST00000393773 LAMC2Q13753 1193 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 CCDC178Q5BJE1 867 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 LNPKQ9C0E8 428 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 UBE2ZQ9H832 354 aaPredicted RBP17.93■□□□□ 0.46
CHMP3-202ENST00000393773 CD320Q9NPF0 282 aa17.93■□□□□ 0.46
CHMP3-202ENST00000393773 TRIOO75962 3097 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 PPP1R11O60927 126 aaPredicted RBP17.92■□□□□ 0.46
CHMP3-202ENST00000393773 CFBP00751 764 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
CHMP3-202ENST00000393773 IKBKEQ14164 716 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 TMEM31Q5JXX7 168 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 IL31RAQ8NI17 732 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 HCN4Q9Y3Q4 1203 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 KIAA1671Q9BY89 1806 aa17.92■□□□□ 0.46
CHMP3-202ENST00000393773 PIEZO1Q92508 2521 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 DHX16O60231 1041 aaKnown RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 LGR5O75473 907 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 UBA1P22314 1058 aaKnown RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 HOXC8P31273 242 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 HSDL1Q3SXM5 330 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 MYSM1Q5VVJ2 828 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 FAM117BQ6P1L5 589 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.461e-9■■■■□ 20.2
CHMP3-202ENST00000393773 SERINC5Q86VE9 423 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 DHX37Q8IY37 1157 aaKnown RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 SP7Q8TDD2 431 aaPredicted RBP17.91■□□□□ 0.46
CHMP3-202ENST00000393773 MTMR8Q96EF0 704 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 C17orf80Q9BSJ5 609 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 EMSYQ7Z589 1322 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 KAT6AQ92794 2004 aa17.91■□□□□ 0.46
CHMP3-202ENST00000393773 FAM86C2PA6NEL3 165 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 GPR37L1O60883 481 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 PGM5Q15124 567 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
CHMP3-202ENST00000393773 STOX1Q6ZVD7 989 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 C16orf70Q9BSU1 422 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 AMNQ9BXJ7 453 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 ZSWIM5Q9P217 1185 aa17.9■□□□□ 0.46
CHMP3-202ENST00000393773 WDFY4Q6ZS81 3184 aa17.89■□□□□ 0.46
CHMP3-202ENST00000393773 SORBS3O60504 671 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 GGPS1O95749 300 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 LEXMQ3ZCV2 418 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 CWC27Q6UX04 472 aaKnown RBP17.89■□□□□ 0.45
CHMP3-202ENST00000393773 SMC5Q8IY18 1101 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 FBXO22Q8NEZ5 403 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
CHMP3-202ENST00000393773 SPATA33Q96N06 139 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 DSCC1Q9BVC3 393 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 VAT1LQ9HCJ6 419 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 INSL6Q9Y581 213 aa17.89■□□□□ 0.45
CHMP3-202ENST00000393773 PI4K2BG5E9Z4 385 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 MYCLP12524 364 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-202ENST00000393773 HOXA13P31271 388 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-202ENST00000393773 SP2Q02086 613 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 SEC23AQ15436 765 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 PLEKHG4Q58EX7 1191 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 DBF4BQ8NFT6 615 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.88■□□□□ 0.45
CHMP3-202ENST00000393773 MAP3K20Q9NYL2 800 aaKnown RBP17.88■□□□□ 0.45
CHMP3-202ENST00000393773 MAD2L2Q9UI95 211 aa17.88■□□□□ 0.45
CHMP3-202ENST00000393773 MYO7AQ13402 2215 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 ZBTB5O15062 677 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 AMHP03971 560 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 KCNA5P22460 613 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 THPOP40225 353 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 IMMTQ16891 758 aaKnown RBP17.87■□□□□ 0.45
CHMP3-202ENST00000393773 KCNV1Q6PIU1 500 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 VSIG10LQ86VR7 867 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 FAM178BQ8IXR5 827 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 MYOCDQ8IZQ8 938 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 UBAC1Q9BSL1 405 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 KRT23Q9C075 422 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 IL25Q9H293 177 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 DIAPH3Q9NSV4 1193 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 PCDHA1Q9Y5I3 950 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 FRMPD4Q14CM0 1322 aa17.87■□□□□ 0.45
CHMP3-202ENST00000393773 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 RSPH10B2B2RC85 870 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 KLRF2D3W0D1 207 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 LGALS2P05162 132 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 RSPH10BP0C881 870 aa17.86■□□□□ 0.45
CHMP3-202ENST00000393773 IL9P15248 144 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms