RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 DCPSQ96C86 337 aaKnown RBP24.8■■□□□ 1.56
HMGA2-203ENST00000393578 ARMCX5Q6P1M9 558 aa24.79■■□□□ 1.56
HMGA2-203ENST00000393578 DYMQ7RTS9 669 aa24.79■■□□□ 1.56
HMGA2-203ENST00000393578 CATSPER3Q86XQ3 398 aa24.79■■□□□ 1.56
HMGA2-203ENST00000393578 BMP2KQ9NSY1 1161 aaPredicted RBP24.79■■□□□ 1.56
HMGA2-203ENST00000393578 RPTORQ8N122 1335 aa24.79■■□□□ 1.56
HMGA2-203ENST00000393578 COBLO75128 1261 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 USP2O75604 605 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 SFPQP23246 707 aaKnown RBP eCLIP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 UBXN2AP68543 259 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 SETQ01105 290 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 C17orf53Q8N3J3 647 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 SLC5A5Q92911 643 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 ADD3Q9UEY8 706 aaKnown RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 LIMA1Q9UHB6 759 aaKnown RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 PARP14Q460N5 1801 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 LRRC10BA6NIK2 292 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 E9PMD0 336 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 MEIS1O00470 390 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 PLA2G4BP0C869 781 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 FCER1AP12319 257 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 SKILP12757 684 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 CCZ1BP86790 482 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 CCZ1P86791 482 aaPredicted RBP24.78■■□□□ 1.56
HMGA2-203ENST00000393578 PSMD2Q13200 908 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 SULF1Q8IWU6 871 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 AFG3L2Q9Y4W6 797 aa24.78■■□□□ 1.56
HMGA2-203ENST00000393578 BICDL2A1A5D9 508 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 SPATA31C1P0DKV0 1188 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 FILIP1LQ4L180 1135 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 SPECC1LQ69YQ0 1117 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.77■■□□□ 1.56
HMGA2-203ENST00000393578 KCTD17Q8N5Z5 321 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 ANKRD20A12PQ8NF67 263 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 ATG4CQ96DT6 458 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 COL20A1Q9P218 1284 aa24.77■■□□□ 1.56
HMGA2-203ENST00000393578 PSMD10O75832 226 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 CCNE1P24864 410 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 PMS1P54277 932 aaKnown RBP24.76■■□□□ 1.55
HMGA2-203ENST00000393578 EHHADHQ08426 723 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 TCP11X2Q5H9J9 407 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 MUM1L1Q5H9M0 696 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 LRCH2Q5VUJ6 765 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 TTI2Q6NXR4 508 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 OTOP1Q7RTM1 612 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 KIAA0895Q8NCT3 520 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 P2RX5Q93086 422 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 DNAJC19Q96DA6 116 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 POLR3CQ9BUI4 534 aaPredicted RBP24.76■■□□□ 1.55
HMGA2-203ENST00000393578 HOMER2Q9NSB8 354 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 TMOD4Q9NZQ9 345 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 POTEFA5A3E0 1075 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 TRIM49BA6NDI0 452 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 POTEIP0CG38 1075 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 IDEP14735 1019 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 PPP2R5CQ13362 524 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 POTEGQ6S5H5 508 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 POTEEQ6S8J3 1075 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 NOC3LQ8WTT2 800 aaKnown RBP24.76■■□□□ 1.55
HMGA2-203ENST00000393578 THAP9Q9H5L6 903 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 ADAMTS5Q9UNA0 930 aa24.76■■□□□ 1.55
HMGA2-203ENST00000393578 KCNJ18B7U540 433 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 SSBP05455 408 aaKnown RBP eCLIP24.75■■□□□ 1.55
HMGA2-203ENST00000393578 OAZ1P54368 228 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 TBX2Q13207 712 aaPredicted RBP24.75■■□□□ 1.55
HMGA2-203ENST00000393578 PRKG1Q13976 671 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 KCNJ12Q14500 433 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 COG2Q14746 738 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 KRT31Q15323 416 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 RBM46Q8TBY0 533 aaKnown RBP24.75■■□□□ 1.55
HMGA2-203ENST00000393578 TRIM47Q96LD4 638 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 TRERF1Q96PN7 1200 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 MXRA8Q9BRK3 442 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 SLC39A2Q9NP94 309 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 DNM3Q9UQ16 869 aa24.75■■□□□ 1.55
HMGA2-203ENST00000393578 DSG3P32926 999 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 MAP3K9P80192 1104 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 DPY19L2Q6NUT2 758 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.74■■□□□ 1.55
HMGA2-203ENST00000393578 SYTL5Q8TDW5 730 aaPredicted RBP24.74■■□□□ 1.55
HMGA2-203ENST00000393578 HPS3Q969F9 1004 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 RBBP6Q7Z6E9 1792 aaKnown RBP24.74■■□□□ 1.55
HMGA2-203ENST00000393578 RLFQ13129 1914 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 NRDCO43847 1150 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 BCRP11274 1271 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 SLC12A3P55017 1021 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 CATSPERGQ6ZRH7 1159 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 NIPA1Q7RTP0 329 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 REPS2Q8NFH8 660 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 WNK4Q96J92 1243 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 EIF2AK1Q9BQI3 630 aaKnown RBP24.74■■□□□ 1.55
HMGA2-203ENST00000393578 ZNF577Q9BSK1 485 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 WDR11Q9BZH6 1224 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 FRMPD4Q14CM0 1322 aa24.74■■□□□ 1.55
HMGA2-203ENST00000393578 EML1O00423 815 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 PPP1R12BO60237 982 aaPredicted RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 GAS7O60861 476 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 VGLL4Q14135 290 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 SH3D19Q5HYK7 790 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms