RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF333Q96JL9 665 aa15.08■□□□□ 0
USP44-202ENST00000393091 SEPT4O43236 478 aa15.07■□□□□ 0
USP44-202ENST00000393091 EIF2AK2P19525 551 aaKnown RBP15.07■□□□□ 0
USP44-202ENST00000393091 INF2Q27J81 1249 aa15.07■□□□□ 0
USP44-202ENST00000393091 FCHSD1Q86WN1 690 aa15.07■□□□□ 0
USP44-202ENST00000393091 SLFN12Q8IYM2 578 aa15.07■□□□□ 0
USP44-202ENST00000393091 RAET1EQ8TD07 263 aa15.07■□□□□ 0
USP44-202ENST00000393091 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
USP44-202ENST00000393091 CYP2B6P20813 491 aa15.07■□□□□ 0
USP44-202ENST00000393091 PPP2R5CQ13362 524 aa15.07■□□□□ 0
USP44-202ENST00000393091 CRISPLD2Q9H0B8 497 aa15.07■□□□□ 0
USP44-202ENST00000393091 TBC1D22BQ9NU19 505 aa15.07■□□□□ 0
USP44-202ENST00000393091 STK24Q9Y6E0 443 aa15.07■□□□□ 0
USP44-202ENST00000393091 PSMD10O75832 226 aa15.06■□□□□ 0
USP44-202ENST00000393091 YEATS4O95619 227 aa15.06■□□□□ 0
USP44-202ENST00000393091 MUTP22033 750 aa15.06■□□□□ 0
USP44-202ENST00000393091 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 0
USP44-202ENST00000393091 TTC38Q5R3I4 469 aa15.06■□□□□ 0
USP44-202ENST00000393091 TSKSQ9UJT2 592 aa15.06■□□□□ 0
USP44-202ENST00000393091 IGKV6D-21A0A0A0MT36 114 aa15.06■□□□□ 0
USP44-202ENST00000393091 FAM205CA6NFA0 338 aa15.06■□□□□ 0
USP44-202ENST00000393091 GJA9P57773 515 aa15.06■□□□□ 0
USP44-202ENST00000393091 HAS1Q92839 578 aa15.06■□□□□ 0
USP44-202ENST00000393091 FAM184BQ9ULE4 1060 aa15.06■□□□□ 0
USP44-202ENST00000393091 DUSP11O75319 330 aaKnown RBP15.06■□□□□ 0
USP44-202ENST00000393091 AKR1A1P14550 325 aa15.06■□□□□ 0
USP44-202ENST00000393091 GUCY1B3Q02153 619 aa15.06■□□□□ 0
USP44-202ENST00000393091 SPIRE1Q08AE8 756 aa15.06■□□□□ 0
USP44-202ENST00000393091 TTLL4Q14679 1199 aa15.06■□□□□ 0
USP44-202ENST00000393091 KCNH7Q9NS40 1196 aa15.06■□□□□ 0
USP44-202ENST00000393091 DDX25Q9UHL0 483 aaKnown RBP15.06■□□□□ 0
USP44-202ENST00000393091 CEP131Q9UPN4 1083 aa15.06■□□□□ 0
USP44-202ENST00000393091 SCN10AQ9Y5Y9 1956 aa15.05■□□□□ 0
USP44-202ENST00000393091 PPP6R2O75170 966 aa15.05■□□□□ -0
USP44-202ENST00000393091 PKP1Q13835 747 aa15.05■□□□□ -0
USP44-202ENST00000393091 NEDD9Q14511 834 aa15.05■□□□□ -0
USP44-202ENST00000393091 PDIA5Q14554 519 aa15.05■□□□□ -0
USP44-202ENST00000393091 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
USP44-202ENST00000393091 VAV3Q9UKW4 847 aa15.05■□□□□ -0
USP44-202ENST00000393091 CNPY2Q9Y2B0 182 aa15.05■□□□□ -0
USP44-202ENST00000393091 WNT7AO00755 349 aa15.05■□□□□ -0
USP44-202ENST00000393091 CTAGE5O15320 804 aa15.05■□□□□ -0
USP44-202ENST00000393091 MSH4O15457 936 aa15.05■□□□□ -0
USP44-202ENST00000393091 MTMR1Q13613 665 aa15.05■□□□□ -0
USP44-202ENST00000393091 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
USP44-202ENST00000393091 WDR78Q5VTH9 848 aa15.05■□□□□ -0
USP44-202ENST00000393091 TMEM87AQ8NBN3 555 aa15.05■□□□□ -0
USP44-202ENST00000393091 KLHDC9Q8NEP7 349 aa15.05■□□□□ -0
USP44-202ENST00000393091 ELP1O95163 1332 aa15.04■□□□□ -0
USP44-202ENST00000393091 INHAP05111 366 aa15.04■□□□□ -0
USP44-202ENST00000393091 UBXN2AP68543 259 aa15.04■□□□□ -0
USP44-202ENST00000393091 CCSAPQ6IQ19 270 aaPredicted RBP15.04■□□□□ -0
USP44-202ENST00000393091 ZNF746Q6NUN9 644 aaPredicted RBP15.04■□□□□ -0
USP44-202ENST00000393091 SEZ6LQ9BYH1 1024 aa15.04■□□□□ -0
USP44-202ENST00000393091 RCOR1Q9UKL0 485 aa15.04■□□□□ -0
USP44-202ENST00000393091 SLC37A4O43826 429 aa15.04■□□□□ -0
USP44-202ENST00000393091 DTNBO60941 627 aa15.04■□□□□ -0
USP44-202ENST00000393091 ARHGAP1Q07960 439 aa15.04■□□□□ -0
USP44-202ENST00000393091 SLC39A14Q15043 492 aa15.04■□□□□ -0
USP44-202ENST00000393091 LHX8Q68G74 356 aa15.04■□□□□ -0
USP44-202ENST00000393091 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
USP44-202ENST00000393091 PGBD1Q96JS3 809 aa15.04■□□□□ -0
USP44-202ENST00000393091 TSEN34Q9BSV6 310 aaKnown RBP15.04■□□□□ -0
USP44-202ENST00000393091 WDR11Q9BZH6 1224 aa15.04■□□□□ -0
USP44-202ENST00000393091 VPS37CA5D8V6 355 aaPredicted RBP15.04■□□□□ -0
USP44-202ENST00000393091 LGR5O75473 907 aa15.04■□□□□ -0
USP44-202ENST00000393091 TDP2O95551 362 aa15.04■□□□□ -0
USP44-202ENST00000393091 LAMC2Q13753 1193 aa15.04■□□□□ -0
USP44-202ENST00000393091 METTL7BQ6UX53 244 aa15.04■□□□□ -0
USP44-202ENST00000393091 PLA2G4DQ86XP0 818 aa15.04■□□□□ -0
USP44-202ENST00000393091 IGSF22Q8N9C0 903 aa15.04■□□□□ -0
USP44-202ENST00000393091 PPTC7Q8NI37 304 aa15.04■□□□□ -0
USP44-202ENST00000393091 AFAP1L1Q8TED9 768 aa15.04■□□□□ -0
USP44-202ENST00000393091 POTEFA5A3E0 1075 aa15.03■□□□□ -0
USP44-202ENST00000393091 NEMFO60524 1076 aa15.03■□□□□ -0
USP44-202ENST00000393091 KPNA6O60684 536 aa15.03■□□□□ -0
USP44-202ENST00000393091 FARP2O94887 1054 aaPredicted RBP15.03■□□□□ -0
USP44-202ENST00000393091 SMPD1P17405 629 aa15.03■□□□□ -0
USP44-202ENST00000393091 SP2Q02086 613 aa15.03■□□□□ -0
USP44-202ENST00000393091 ANO1Q5XXA6 986 aa15.03■□□□□ -0
USP44-202ENST00000393091 SMAP1Q8IYB5 467 aaPredicted RBP15.03■□□□□ -0
USP44-202ENST00000393091 DDX20Q9UHI6 824 aaKnown RBP15.03■□□□□ -0
USP44-202ENST00000393091 OGDHLQ9ULD0 1010 aa15.03■□□□□ -0
USP44-202ENST00000393091 A6NJR5 290 aa15.03■□□□□ -0
USP44-202ENST00000393091 ADAMTS4O75173 837 aa15.03■□□□□ -0
USP44-202ENST00000393091 ARP10275 920 aa15.03■□□□□ -0
USP44-202ENST00000393091 UBA1P22314 1058 aaKnown RBP15.03■□□□□ -0
USP44-202ENST00000393091 SLC4A3P48751 1232 aa15.03■□□□□ -0
USP44-202ENST00000393091 ITGB3BPQ13352 177 aaPredicted RBP15.03■□□□□ -0
USP44-202ENST00000393091 CCDC144BQ3MJ40 725 aa15.03■□□□□ -0
USP44-202ENST00000393091 ANKLE1Q8NAG6 615 aa15.03■□□□□ -0
USP44-202ENST00000393091 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
USP44-202ENST00000393091 CFAP45Q9UL16 551 aa15.03■□□□□ -0
USP44-202ENST00000393091 PCDHB6Q9Y5E3 794 aa15.03■□□□□ -0
USP44-202ENST00000393091 EMSYQ7Z589 1322 aa15.02■□□□□ -0
USP44-202ENST00000393091 FAM237AA0A1B0GTK4 181 aa15.02■□□□□ -0
USP44-202ENST00000393091 CCNT1O60563 726 aaKnown RBP15.02■□□□□ -0
USP44-202ENST00000393091 ARIH2O95376 493 aa15.02■□□□□ -0
USP44-202ENST00000393091 PRKAR2AP13861 404 aaKnown RBP15.02■□□□□ -0
USP44-202ENST00000393091 KRT76Q01546 638 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms