RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 ATP2A1O14983 1001 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 HOXA7P31268 230 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 PRCPP42785 496 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 UBASH3AP57075 661 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 SYTL5Q8TDW5 730 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 UIMC1Q96RL1 719 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 IMPACTQ9P2X3 320 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 NRBP1Q9UHY1 535 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 A0A0G2JMZ2 1700 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 MED24O75448 989 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 PTGS1P23219 599 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 RPA1P27694 616 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 NF2P35240 595 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 PPP1R2P41236 205 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 UBXN2AP68543 259 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 PDE4DQ08499 809 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 STIM1Q13586 685 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 DHX8Q14562 1220 aaKnown RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 COBLL1Q53SF7 1204 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 CDKAL1Q5VV42 579 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 NCAPH2Q6IBW4 605 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 UNC13DQ70J99 1090 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 NIPA1Q7RTP0 329 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 KCTD17Q8N5Z5 321 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 CDCA5Q96FF9 252 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 ZNF830Q96NB3 372 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 MXRA8Q9BRK3 442 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 ZMYND15Q9H091 742 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 KCNF1Q9H3M0 494 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 HOMER2Q9NSB8 354 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 SAMSN1Q9NSI8 373 aaKnown RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 ZNF214Q9UL59 606 aaPredicted RBP12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 KIAA1024Q9UPX6 916 aa12.81□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTECB2RU33 542 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 PSMD10O75832 226 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 BCRP11274 1271 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 CLCN1P35523 988 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 STX17P56962 302 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 RPS6P62753 249 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 PPP2R5CQ13362 524 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 CCDC144BQ3MJ40 725 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 PCNX4Q63HM2 1172 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 NELFBQ8WX92 580 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 MAF1Q9H063 256 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 HOXC10Q9NYD6 342 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 IQCA1LA6NCM1 817 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 ZNF500O60304 480 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 CDK11BP21127 795 aaKnown RBP12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 PPATQ06203 517 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 CATSPER3Q86XQ3 398 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 RNF146Q9NTX7 359 aa12.8□□□□□ -0.36
SMARCAL1-203ENST00000392128 SPDYE16A6NNV3 312 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 PSMA7O14818 248 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 SPATA31C1P0DKV0 1188 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 TKFCQ3LXA3 575 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 SNRNP48Q6IEG0 339 aaKnown RBP12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 ANKRD13AQ8IZ07 590 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 DDX12PQ92771 950 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 DHTKD1Q96HY7 919 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 TAF1DQ9H5J8 278 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 RIPK3Q9Y572 518 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 E9PMD0 336 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 ITGB5P18084 799 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 GSDMDP57764 484 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 TMEM132BQ14DG7 1078 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 SLC30A10Q6XR72 485 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 ERO1BQ86YB8 467 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 NAP1L5Q96NT1 182 aaPredicted RBP12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 ZNF577Q9BSK1 485 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 TEX13BQ9BXU2 312 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 WDR11Q9BZH6 1224 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 UBIAD1Q9Y5Z9 338 aa12.79□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 GAS7O60861 476 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 ARP10275 920 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 EHHADHQ08426 723 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 STK4Q13043 487 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 PSMD2Q13200 908 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 DYMQ7RTS9 669 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 IL31RAQ8NI17 732 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 DNAJC19Q96DA6 116 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 RIT2Q99578 217 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 TUFT1Q9NNX1 390 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 LOXHD1Q8IVV2 1947 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms