RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 BSDC1Q9NW68 430 aaPredicted RBP19.88■□□□□ 0.77
ERCC2-201ENST00000391941 TRAF5O00463 557 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 OPA1O60313 960 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 TCP1P17987 556 aaKnown RBP19.88■□□□□ 0.77
ERCC2-201ENST00000391941 UBE2SQ16763 222 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 CEP85LQ5SZL2 805 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 CNNM4Q6P4Q7 775 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 SV2BQ7L1I2 683 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 ZNF444Q8N0Y2 327 aaPredicted RBP19.88■□□□□ 0.77
ERCC2-201ENST00000391941 NOX5Q96PH1 765 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 CD248Q9HCU0 757 aa19.88■□□□□ 0.77
ERCC2-201ENST00000391941 NOL4O94818 638 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 TMOD1P28289 359 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 PDXDC1Q6P996 788 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 LRRC55Q6ZSA7 311 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 FBXO33Q7Z6M2 555 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 NEK8Q86SG6 692 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 A0A1B0GUL6 1792 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 HNRNPH3P31942 346 aaKnown RBP19.87■□□□□ 0.77
ERCC2-201ENST00000391941 FLT3P36888 993 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 PRPHP41219 470 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 IFT88Q13099 833 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 MAN2A1Q16706 1144 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 ZNF572Q7Z3I7 529 aaPredicted RBP19.87■□□□□ 0.77
ERCC2-201ENST00000391941 CDK5RAP3Q96JB5 506 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 CUEDC2Q9H467 287 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 BCAS3Q9H6U6 928 aa19.87■□□□□ 0.77
ERCC2-201ENST00000391941 SRP68Q9UHB9 627 aaKnown RBP19.87■□□□□ 0.77
ERCC2-201ENST00000391941 KIAA0753Q2KHM9 967 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 ASTE1Q2TB18 679 aaPredicted RBP19.86■□□□□ 0.77
ERCC2-201ENST00000391941 CCDC40Q4G0X9 1142 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 SBK1Q52WX2 424 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 NAA35Q5VZE5 725 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 CALML4Q96GE6 196 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 USP17L5A8MUK1 530 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 DCDC2CA8MYV0 355 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 LAD1O00515 517 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 EDIL3O43854 480 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 CFAP221Q4G0U5 840 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 FAM83BQ5T0W9 1011 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 TBC1D9BQ66K14 1250 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 DAGLBQ8NCG7 672 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 SNX29Q8TEQ0 813 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 LARP4BQ92615 738 aaKnown RBP19.86■□□□□ 0.77
ERCC2-201ENST00000391941 PLAAQ9Y263 795 aa19.86■□□□□ 0.77
ERCC2-201ENST00000391941 E7EVH7 732 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 NR1D1P20393 614 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 EMBQ6PCB8 327 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 IQCKQ8N0W5 287 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 OTUD6BQ8N6M0 293 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 NEUROG2Q9H2A3 272 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 KCNK3O14649 394 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 PRLRP16471 622 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 TNNI2P48788 182 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 ITIH3Q06033 890 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 SEMA3FQ13275 785 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 CALCRLQ16602 461 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 PTF1AQ7RTS3 328 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 MAGEF1Q9HAY2 307 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 CPP00450 1065 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 ADAT2Q7Z6V5 191 aaKnown RBP19.85■□□□□ 0.77
ERCC2-201ENST00000391941 LRRC47Q8N1G4 583 aaKnown RBP19.85■□□□□ 0.77
ERCC2-201ENST00000391941 AK8Q96MA6 479 aa19.85■□□□□ 0.77
ERCC2-201ENST00000391941 JPH2Q9BR39 696 aaPredicted RBP19.85■□□□□ 0.77
ERCC2-201ENST00000391941 PALM3A6NDB9 673 aaPredicted RBP19.84■□□□□ 0.77
ERCC2-201ENST00000391941 TRIM31Q9BZY9 425 aa19.84■□□□□ 0.77
ERCC2-201ENST00000391941 RASA1P20936 1047 aa19.84■□□□□ 0.77
ERCC2-201ENST00000391941 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
ERCC2-201ENST00000391941 IFT20Q8IY31 132 aa19.84■□□□□ 0.77
ERCC2-201ENST00000391941 ZNF473Q8WTR7 871 aaKnown RBP19.84■□□□□ 0.77
ERCC2-201ENST00000391941 ZMYND12Q9H0C1 365 aa19.84■□□□□ 0.77
ERCC2-201ENST00000391941 DDX47Q9H0S4 455 aaKnown RBP19.84■□□□□ 0.77
ERCC2-201ENST00000391941 ABCA3Q99758 1704 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 LCA5LO95447 670 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 COPB2P35606 906 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 GNAQP50148 359 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 RPS8P62241 208 aaKnown RBP19.83■□□□□ 0.77
ERCC2-201ENST00000391941 MCTP2Q6DN12 878 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 IKZF4Q9H2S9 585 aa19.83■□□□□ 0.77
ERCC2-201ENST00000391941 MYH14Q7Z406 1995 aaKnown RBP19.83■□□□□ 0.76
ERCC2-201ENST00000391941 GRID2IPA4D2P6 1211 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 ITGA4P13612 1032 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 CAVIN3Q969G5 261 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 CEP95Q96GE4 821 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 CCT8L2Q96SF2 557 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 GPCPD1Q9NPB8 672 aa19.83■□□□□ 0.76
ERCC2-201ENST00000391941 COL22A1Q8NFW1 1626 aaPredicted RBP19.83■□□□□ 0.76
ERCC2-201ENST00000391941 ZNF335Q9H4Z2 1342 aaPredicted RBP19.83■□□□□ 0.76
ERCC2-201ENST00000391941 E9PMD0 336 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 RAD21O60216 631 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 AMPD3Q01432 767 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 QPCTQ16769 361 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 SOGA3Q5TF21 947 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 SFMBT2Q5VUG0 894 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 GALNT17Q6IS24 598 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 GBP6Q6ZN66 633 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 REXO1Q8N1G1 1221 aaKnown RBP19.82■□□□□ 0.76
ERCC2-201ENST00000391941 GDF3Q9NR23 364 aa19.82■□□□□ 0.76
ERCC2-201ENST00000391941 ACTN3Q08043 901 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms