RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 PPTC7Q8NI37 304 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 AFG1LQ8WV93 481 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 GPRASP2Q96D09 838 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 UBE2OQ9C0C9 1292 aaKnown RBP14.53□□□□□ -0.08
GGPS1-203ENST00000391855 PCDHA6Q9UN73 950 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 PCDHA8Q9Y5H6 950 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 CEP290O15078 2479 aa14.53□□□□□ -0.08
GGPS1-203ENST00000391855 SMCO2A6NFE2 343 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 CPLX1O14810 134 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 GGPS1O95749 300 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 RAG1P15918 1043 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 UBA1P22314 1058 aaKnown RBP14.52□□□□□ -0.08
GGPS1-203ENST00000391855 MRPS9P82933 396 aaKnown RBP14.52□□□□□ -0.08
GGPS1-203ENST00000391855 NTRK3Q16288 839 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 DGKDQ16760 1214 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 UBE2SQ16763 222 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 CELF3Q5SZQ8 465 aaKnown RBP14.52□□□□□ -0.08
GGPS1-203ENST00000391855 TYW1BQ6NUM6 668 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 FAM177A1Q8N128 213 aaPredicted RBP14.52□□□□□ -0.08
GGPS1-203ENST00000391855 GIMAP8Q8ND71 665 aaPredicted RBP14.52□□□□□ -0.08
GGPS1-203ENST00000391855 KATNAL1Q9BW62 490 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 TBX21Q9UL17 535 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 SCN10AQ9Y5Y9 1956 aa14.52□□□□□ -0.08
GGPS1-203ENST00000391855 TRIM43BA6NCK2 446 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 SPATA31C2B4DYI2 1134 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 CDKL5O76039 1030 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 CD4P01730 458 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 HOXD8P13378 290 aaPredicted RBP14.51□□□□□ -0.09
GGPS1-203ENST00000391855 GNA11P29992 359 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
GGPS1-203ENST00000391855 MDM2Q00987 491 aaPredicted RBP14.51□□□□□ -0.09
GGPS1-203ENST00000391855 MYSM1Q5VVJ2 828 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 NFRKBQ6P4R8 1299 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 TDHQ8IZJ6 230 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 TRIM43Q96BQ3 446 aaPredicted RBP14.51□□□□□ -0.09
GGPS1-203ENST00000391855 SENP7Q9BQF6 1050 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 SLC26A6Q9BXS9 759 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 ANO3Q9BYT9 981 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 C6orf50Q9HD87 102 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 GRIN2DO15399 1336 aa14.51□□□□□ -0.09
GGPS1-203ENST00000391855 MAFGO15525 162 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 PSMC6P62333 389 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 METTL7BQ6UX53 244 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 SH3RF1Q7Z6J0 888 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 BICD2Q8TD16 824 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 PHKBQ93100 1093 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 SPATA33Q96N06 139 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 ZMYND12Q9H0C1 365 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 MLXIPQ9HAP2 919 aa14.5□□□□□ -0.09
GGPS1-203ENST00000391855 PPFIA4O75335 1185 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 DEXIO95424 95 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 TIMP1P01033 207 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 SSRP1Q08945 709 aaKnown RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 PKN1Q16512 942 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 SESTD1Q86VW0 696 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 BADQ92934 168 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 NCOA5Q9HCD5 579 aaKnown RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 SH3GLB2Q9NR46 395 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 RTEL1Q9NZ71 1219 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 UBIAD1Q9Y5Z9 338 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 NOP56O00567 594 aaKnown RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 F2P00734 622 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 SREBF1P36956 1147 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 MTMR1Q13613 665 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 NBPF20Q3BBV1 942 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 FAM47CQ5HY64 1035 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 MFSD5Q6N075 450 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 REXO1Q8N1G1 1221 aaKnown RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 SLKQ9H2G2 1235 aaPredicted RBP14.49□□□□□ -0.09
GGPS1-203ENST00000391855 JADE2Q9NQC1 790 aa14.49□□□□□ -0.09
GGPS1-203ENST00000391855 STK36Q9NRP7 1315 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 B4GALT4O60513 344 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 PFKFB2O60825 505 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 AK2P54819 239 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 SP2Q02086 613 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 FPGSQ05932 587 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 SEMA3FQ13275 785 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 HSDL1Q3SXM5 330 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 LRIT3Q3SXY7 679 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 C8orf34Q49A92 452 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 TMEM199Q8N511 208 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 ZFP91Q96JP5 570 aaPredicted RBP14.48□□□□□ -0.09
GGPS1-203ENST00000391855 C22orf23Q9BZE7 217 aa14.48□□□□□ -0.09
GGPS1-203ENST00000391855 ITGB5P18084 799 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 PSEN2P49810 448 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 FXR1P51114 621 aaKnown RBP eCLIP14.47□□□□□ -0.09
GGPS1-203ENST00000391855 STK3Q13188 491 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 PPIGQ13427 754 aaKnown RBP eCLIP14.47□□□□□ -0.09
GGPS1-203ENST00000391855 CEP55Q53EZ4 464 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 GALNT17Q6IS24 598 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 NIPA1Q7RTP0 329 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 KAT2BQ92831 832 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 MXRA8Q9BRK3 442 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 TRPV6Q9H1D0 765 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 HIPK3Q9H422 1215 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 TPCN1Q9ULQ1 816 aa14.47□□□□□ -0.09
GGPS1-203ENST00000391855 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms